RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 FAM136AQ96C01 138 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 SGSM3Q96HU1 749 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 TRIM56Q9BRZ2 755 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 SLC25A23Q9BV35 468 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 IL22Q9GZX6 179 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 ING2Q9H160 280 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 P2RY12Q9H244 342 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 EIF2B3Q9NR50 452 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 IL1RAPL1Q9NZN1 696 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 DHCR7Q9UBM7 475 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 SLC39A10Q9ULF5 831 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 RUVBL2Q9Y230 463 aaKnown RBP9.25□□□□□ -0.93
MSH5-218ENST00000494646 ZKSCAN5Q9Y2L8 839 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 CRYL1Q9Y2S2 319 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 NFS1Q9Y697 457 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 HEATR5BQ9P2D3 2071 aa9.25□□□□□ -0.93
MSH5-218ENST00000494646 PCSK5Q92824 1860 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 H3BMH7 237 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 GOLGA8MH3BSY2 632 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 KDM1AO60341 852 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 TMEM63AO94886 807 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 SLCO2B1O94956 709 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 F7P08709 466 aaPredicted RBP9.24□□□□□ -0.93
MSH5-218ENST00000494646 CHRM3P20309 590 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 MAGP20916 626 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 PKLRP30613 574 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 OTX2P32243 289 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 KIR2DS3Q14952 304 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 SLC5A12Q1EHB4 618 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 CTSL3PQ5NE16 218 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 ANKRD22Q5VYY1 191 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 ZNF385CQ66K41 422 aaPredicted RBP9.24□□□□□ -0.93
MSH5-218ENST00000494646 FCRL6Q6DN72 434 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 TTC27Q6P3X3 843 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 CASC4Q6P4E1 433 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 TTC23LQ6PF05 361 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 FIGLAQ6QHK4 219 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 FAM198BQ6UWH4 519 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 OTOAQ7RTW8 1153 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 SDCCAG8Q86SQ7 713 aaPredicted RBP9.24□□□□□ -0.93
MSH5-218ENST00000494646 TMEM151BQ8IW70 566 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 GSDMBQ8TAX9 411 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 ADAMTS17Q8TE56 1095 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 SEC14L1Q92503 715 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 PEX13Q92968 403 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 MAGOHBQ96A72 148 aaKnown RBP9.24□□□□□ -0.93
MSH5-218ENST00000494646 PANX3Q96QZ0 392 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 MENTQ9BUN1 341 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 KIFC1Q9BW19 673 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 HOMER3Q9NSC5 361 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 TXLNGQ9NUQ3 528 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 IFT80Q9P2H3 777 aaPredicted RBP9.24□□□□□ -0.93
MSH5-218ENST00000494646 GALPQ9UBC7 116 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 NDOR1Q9UHB4 597 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 GPN3Q9UHW5 284 aaPredicted RBP9.24□□□□□ -0.93
MSH5-218ENST00000494646 GNPTGQ9UJJ9 305 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 PLCL2Q9UPR0 1127 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 PLAAQ9Y263 795 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 DOCK10Q96BY6 2186 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 HECTD1Q9ULT8 2610 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 DOPEY2Q9Y3R5 2298 aa9.24□□□□□ -0.93
MSH5-218ENST00000494646 MASP2O00187 686 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 AP3B1O00203 1094 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 RASGRF2O14827 1237 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 NRDCO43847 1150 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 NIPSNAP2O75323 286 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 C1orf105O95561 183 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 RPN2P04844 631 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 TPSB2P20231 275 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 ARNTP27540 789 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 BDKRB1P46663 353 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 YBX1P67809 324 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 DCDP81605 110 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 SARNPP82979 210 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 RAPSNQ13702 412 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 KCNJ11Q14654 390 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 NCF4Q15080 339 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 TMED2Q15363 201 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 TPSAB1Q15661 275 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 RHBDD2Q6NTF9 364 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 CNSTQ6PJW8 725 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 UNC5DQ6UXZ4 953 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 TTLL10Q6ZVT0 673 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 CAND1Q86VP6 1230 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 MCATQ8IVS2 390 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 DCUN1D3Q8IWE4 304 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 FDCSPQ8NFU4 85 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 OR2L8Q8NGY9 312 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 RAD51AP1Q96B01 352 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 PBKQ96KB5 322 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 BIRC8Q96P09 236 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 NDC1Q9BTX1 674 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 MRM3Q9HC36 420 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 EURLQ9NYK6 297 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 SOX13Q9UN79 622 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 PTRH2Q9Y3E5 179 aaKnown RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 AP1M2Q9Y6Q5 423 aa9.23□□□□□ -0.93
MSH5-218ENST00000494646 RP1L1Q8IWN7 2480 aaPredicted RBP9.23□□□□□ -0.93
MSH5-218ENST00000494646 SCN2AQ99250 2005 aa9.22□□□□□ -0.93
MSH5-218ENST00000494646 TTLL8A6PVC2 850 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms