RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 GRID2IPA4D2P6 1211 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 A6NCN8 305 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 A8MU76 341 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 KIR2DS3K7RE56 304 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 KMOO15229 486 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 ANXA9O76027 345 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 PTMAP06454 111 aaKnown RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 FGF3P11487 239 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 ZNF7P17097 686 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 XRCC1P18887 633 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 CSF2RBP32927 897 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CSTF2P33240 577 aaKnown RBP eCLIP7.93□□□□□ -1.14
RIF1-211ENST00000494333 SPAM1P38567 509 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 MAPK9P45984 424 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CLCNKAP51800 687 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 GEMP55040 296 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 TRA2AQ13595 282 aaKnown RBP eCLIP7.93□□□□□ -1.14
RIF1-211ENST00000494333 GTF2H3Q13889 308 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 PRPSAP1Q14558 356 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 PTPRCAPQ14761 206 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 KIR2DS5Q14953 304 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CHRNA6Q15825 494 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 KHDC1Q4VXA5 237 aaKnown RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 ZDHHC20Q5W0Z9 365 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 RANBP10Q6VN20 620 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 PEX26Q7Z412 305 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 ZFAND4Q86XD8 727 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 TMEM139Q8IV31 216 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 ZNF547Q8IVP9 402 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CDKL3Q8IVW4 592 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 SYCE1Q8N0S2 351 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 TTC30BQ8N4P2 665 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 UBL4BQ8N7F7 174 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 LRRC57Q8N9N7 239 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CCDC110Q8TBZ0 833 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 BRSK1Q8TDC3 778 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 ZBTB8AQ96BR9 441 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 VPS35Q96QK1 796 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CCNL2Q96S94 520 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 DPYSL5Q9BPU6 564 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 APOL2Q9BQE5 337 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 DESI2Q9BSY9 194 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 FICDQ9BVA6 458 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 GBA3Q9H227 469 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 FOXJ2Q9P0K8 574 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 CPNE7Q9UBL6 633 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 TRIM10Q9UDY6 481 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 PACSIN2Q9UNF0 486 aaPredicted RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 AAR2Q9Y312 384 aaKnown RBP7.93□□□□□ -1.14
RIF1-211ENST00000494333 PKP3Q9Y446 797 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 LRP4O75096 1905 aa7.93□□□□□ -1.14
RIF1-211ENST00000494333 COL27A1Q8IZC6 1860 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 GLYATL1P3A0A0U1RQE8 302 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 GOLGA6L9A6NEM1 432 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 C2orf81A6NN90 581 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 EFCAB7A8K855 629 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 PDZK1P1A8MUH7 402 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 K7ENP7 123 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 STX7O15400 261 aaKnown RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 GPR39O43194 453 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 DUX1O43812 170 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 PPFIA2O75334 1257 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 POP7O75817 140 aaKnown RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 VIPP01282 170 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 PRB1P04280 392 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 THRAP10827 490 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 LIPCP11150 499 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 VCLP18206 1134 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 LPOP22079 712 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 IDSP22304 550 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 PSMB4P28070 264 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 CA5AP35218 305 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 PTPN7P35236 360 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 DRG2P55039 364 aaKnown RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 IRF9Q00978 393 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 RHDQ02161 417 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 OLIG2Q13516 323 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 ITGA9Q13797 1035 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 TAF1AQ15573 450 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 SEPT7Q16181 437 aaKnown RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 TAF1BQ53T94 588 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 CD276Q5ZPR3 534 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 INO80CQ6PI98 192 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 WDR74Q6RFH5 385 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 ABRAXAS1Q6UWZ7 409 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 FAM151BQ6UXP7 276 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 C11orf96Q7Z7L8 435 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 TRAPPC5Q8IUR0 188 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 LRRC56Q8IYG6 542 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 TXLNBQ8N3L3 684 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 LSM14AQ8ND56 463 aaKnown RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 ZNF398Q8TD17 642 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 DTX3LQ8TDB6 740 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 SNRNP27Q8WVK2 155 aaKnown RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 JPH3Q8WXH2 748 aaPredicted RBP7.92□□□□□ -1.14
RIF1-211ENST00000494333 ART4Q93070 314 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 TAAR9Q96RI9 348 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 TIMM29Q9BSF4 260 aa7.92□□□□□ -1.14
RIF1-211ENST00000494333 TBC1D10AQ9BXI6 508 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms