RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 ZNF160Q9HCG1 818 aa13.64□□□□□ -0.23
PRPF40A-211ENST00000493468 CUTCQ9NTM9 273 aa13.64□□□□□ -0.23
PRPF40A-211ENST00000493468 KLHL8Q9P2G9 620 aaPredicted RBP13.64□□□□□ -0.23
PRPF40A-211ENST00000493468 MRPS2Q9Y399 296 aaKnown RBP13.64□□□□□ -0.23
PRPF40A-211ENST00000493468 ZNF469Q96JG9 3925 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 A0A1B0GTH6 734 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 KDM1AO60341 852 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 SLC19A2O60779 497 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 PRR35P0CG20 571 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 TPBGLP0DKB5 382 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ACADLP28330 430 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 PEBP1P30086 187 aaKnown RBP13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 TLE4Q04727 773 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 GRM7Q14831 915 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 GPR33Q49SQ1 333 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 TCTE1Q5JU00 501 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ATG9BQ674R7 924 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 SHISA6Q6ZSJ9 500 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 RFX6Q8HWS3 928 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 MCATQ8IVS2 390 aaKnown RBP13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 CEP97Q8IW35 865 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ZNF567Q8N184 647 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 OR5K2Q8NHB8 316 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ZNF285Q96NJ3 590 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 TREX2Q9BQ50 279 aaPredicted RBP13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 FICDQ9BVA6 458 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ENKD1Q9H0I2 346 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 LUC7LQ9NQ29 371 aaKnown RBP13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ZDHHC3Q9NYG2 299 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 PTGFRNQ9P2B2 879 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 SH3BGRL2Q9UJC5 107 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 ASF1AQ9Y294 204 aa13.63□□□□□ -0.23
PRPF40A-211ENST00000493468 TRBV5-4A0A0C4DH59 114 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 FITM1A5D6W6 292 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 ISM1B1AKI9 464 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 LIN7AO14910 233 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 DIAPH2O60879 1101 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 BMP10O95393 424 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 AP2A1O95782 977 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 SERPINA7P05543 415 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 H2AFZP0C0S5 128 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 MYBL2P10244 700 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 ESRRAP11474 423 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 HOXB4P17483 251 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 MAGP20916 626 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 ZNF140P52738 457 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 DYNLT1P63172 113 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 CACNG1Q06432 222 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 KLC1Q07866 573 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 Q6ZPB1 254 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 RIPOR1Q6ZS17 1223 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 H2AFVQ71UI9 128 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 NDUFAF7Q7L592 441 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 BRIX1Q8TDN6 353 aaKnown RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 PLA2G3Q9NZ20 509 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 ZNF835Q9Y2P0 537 aa13.62□□□□□ -0.23
PRPF40A-211ENST00000493468 NSG1A0A0A6YYJ2 146 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 FANCGO15287 622 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 AP2A2O94973 939 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 CRTAMO95727 393 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 KRT1P04264 644 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 COX6A1P12074 109 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 ACRV1P26436 265 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 NSG1P42857 185 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 CDSNQ15517 529 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 NFKBIBQ15653 356 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 C3AR1Q16581 482 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 FAM214AQ32MH5 1076 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 ZC3H12BQ5HYM0 836 aaKnown RBP13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 RANBP10Q6VN20 620 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 PID1Q7Z2X4 250 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 TTC29Q8NA56 475 aaPredicted RBP13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 OR13C4Q8NGS5 318 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 STT3BQ8TCJ2 826 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 ADAMTS18Q8TE60 1221 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 THAP3Q8WTV1 239 aaPredicted RBP13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 CTNNBL1Q8WYA6 563 aaPredicted RBP13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 MESP1Q9BRJ9 268 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 GPAMQ9HCL2 828 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 TRHDEQ9UKU6 1024 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 GTF3C1Q12789 2109 aa13.61□□□□□ -0.23
PRPF40A-211ENST00000493468 IGLV3-12A0A075B6K2 115 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 QSOX1O00391 747 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 PRAMEF2O60811 474 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 ANXA9O76027 345 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 AGTP01019 485 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 ZGLP1P0C6A0 271 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 PKLRP30613 574 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 ADRA1AP35348 466 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 OR1D4P47884 311 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 RAB28P51157 221 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 GEMP55040 296 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 AP2B1P63010 937 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 PLOD1Q02809 727 aaPredicted RBP13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 OCA2Q04671 838 aa13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
PRPF40A-211ENST00000493468 TFDP2Q14188 446 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms