RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 VSIG1Q86XK7 387 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 KMT5CQ86Y97 462 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 KLHL7Q8IXQ5 586 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 SRRM1Q8IYB3 904 aaKnown RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 MR1Q95460 341 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 ZNF501Q96CX3 271 aaPredicted RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 CXorf40BQ96DE9 158 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 MAGEB18Q96M61 343 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 LRFN5Q96NI6 719 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 SERPINB12Q96P63 405 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 ZFYVE1Q9HBF4 777 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 UTP6Q9NYH9 597 aaKnown RBP12.78□□□□□ -0.36
HDAC3-213ENST00000492506 TTLL3Q9Y4R7 772 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 SCINQ9Y6U3 715 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 ZFHX3Q15911 3703 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 PCM1Q15154 2024 aa12.78□□□□□ -0.36
HDAC3-213ENST00000492506 DOCK10Q96BY6 2186 aa12.77□□□□□ -0.36
HDAC3-213ENST00000492506 TACC2O95359 2948 aa12.77□□□□□ -0.36
HDAC3-213ENST00000492506 DCHS2Q6V1P9 2916 aa12.77□□□□□ -0.36
HDAC3-213ENST00000492506 F8P00451 2351 aa12.77□□□□□ -0.36
HDAC3-213ENST00000492506 NUP210LQ5VU65 1888 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 VEGFDO43915 354 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 CD86P42081 329 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 HSD11B2P80365 405 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 PDE1BQ01064 536 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 SLC34A1Q06495 639 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 CBX3Q13185 183 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 GALNT3Q14435 633 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 GPR19Q15760 415 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 ZRANB3Q5FWF4 1079 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 CRB2Q5IJ48 1285 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 PLEKHS1Q5SXH7 462 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 PRAMEF17Q5VTA0 474 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 RNF220Q5VTB9 566 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 TIGD7Q6NT04 549 aaPredicted RBP12.77□□□□□ -0.37
HDAC3-213ENST00000492506 ZBTB2Q8N680 514 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 OR2W6PQ8NHA6 318 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 HAUS1Q96CS2 278 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 MS4A14Q96JA4 679 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 C5orf34Q96MH7 638 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 TRIB3Q96RU7 358 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 BARD1Q99728 777 aaKnown RBP12.77□□□□□ -0.37
HDAC3-213ENST00000492506 MRPL47Q9HD33 250 aaKnown RBP12.77□□□□□ -0.37
HDAC3-213ENST00000492506 NMRK1Q9NWW6 199 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 GPR83Q9NYM4 423 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 MAP10Q9P2G4 905 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 TCFL5Q9UL49 500 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 G3BP2Q9UN86 482 aaKnown RBP12.77□□□□□ -0.37
HDAC3-213ENST00000492506 TFR2Q9UP52 801 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 SRPK3Q9UPE1 567 aa12.77□□□□□ -0.37
HDAC3-213ENST00000492506 SETD2Q9BYW2 2564 aaPredicted RBP12.76□□□□□ -0.37
HDAC3-213ENST00000492506 TLCD2A6NGC4 264 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 A6NL46 340 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 LRRC53A6NM62 1247 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 MEN1O00255 615 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 RASGRF2O14827 1237 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 CDK14O94921 469 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 PIRTP0C851 137 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 PRF1P14222 555 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 BPIP17213 487 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 RORAP35398 523 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 SESN3P58005 492 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 CYLC2Q14093 348 aaPredicted RBP12.76□□□□□ -0.37
HDAC3-213ENST00000492506 DPYSL3Q14195 570 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 RPE65Q16518 533 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 FAM182AQ5T1J6 154 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 RGS9BPQ6ZS82 235 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 MED25Q71SY5 747 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 TMEM126BQ8IUX1 230 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 CROCCP3Q8IVE0 287 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 DSELQ8IZU8 1212 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 CISD2Q8N5K1 135 aaKnown RBP12.76□□□□□ -0.37
HDAC3-213ENST00000492506 CNTD1Q8N815 330 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 NIPA2Q8N8Q9 360 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 TMEM102Q8N9M5 508 aaPredicted RBP12.76□□□□□ -0.37
HDAC3-213ENST00000492506 TTC13Q8NBP0 860 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 FAM13CQ8NE31 585 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 STMN2Q93045 179 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 BTBD6Q96KE9 485 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 CD180Q99467 661 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
HDAC3-213ENST00000492506 ADGRE3Q9BY15 652 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 NLNQ9BYT8 704 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 MAGEE1Q9HCI5 957 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 LATS2Q9NRM7 1088 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 NKIRAS1Q9NYS0 192 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 STX18Q9P2W9 335 aaKnown RBP12.76□□□□□ -0.37
HDAC3-213ENST00000492506 SNX7Q9UNH6 387 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 SHOC2Q9UQ13 582 aa12.76□□□□□ -0.37
HDAC3-213ENST00000492506 OR5K3A6NET4 321 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 ANKUB1A6NFN9 424 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 SVILO95425 2214 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 MYBL1P10243 752 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 ZNF24P17028 368 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 PRKCIP41743 596 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 GBE1Q04446 702 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 DMPKQ09013 629 aa12.75□□□□□ -0.37
HDAC3-213ENST00000492506 TMEM115Q12893 351 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms