RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 RPS18P62269 152 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 ERV3-1Q14264 604 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 FASTKD3Q14CZ7 662 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 ZIC1Q15915 447 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 LONRF1Q17RB8 773 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 ANKRD20A4Q4UJ75 823 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 FASTKD1Q53R41 847 aaKnown RBP12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 SPANXN3Q5MJ09 141 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 UNC5AQ6ZN44 842 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 CAPN12Q6ZSI9 719 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 TRIM73Q86UV7 250 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 LMNTD1Q8N9Z9 388 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 OR1L3Q8NH93 324 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 ANKZF1Q9H8Y5 726 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 FAM60AQ9NP50 221 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 C20orf96Q9NUD7 363 aaPredicted RBP12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 SOHLH2Q9NX45 425 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 ACTR10Q9NZ32 417 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 TUBD1Q9UJT1 453 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 KCNMB2Q9Y691 235 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 TEX264Q9Y6I9 313 aa12.28□□□□□ -0.44
SEC61A1-206ENST00000491668 H3BMH7 237 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 MATN2O00339 956 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PFDN6O15212 129 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 GPC4O75487 556 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CREG1O75629 220 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 SCRG1O75711 98 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CTSBP07858 339 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 OR56A5P0C7T3 313 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CCNYL3P0C7X3 344 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 MSL3P1P0C860 447 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 UGT2B7P16662 529 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CDH3P22223 829 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PEBP1P30086 187 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 RORAP35398 523 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PPARGP37231 505 aaPredicted RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 GABRA4P48169 554 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CSE1LP55060 971 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 MC1RQ01726 317 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PRKAA1Q13131 559 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 GRB7Q14451 532 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CRYMQ14894 314 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 SLMAPQ14BN4 828 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PLEKHS1Q5SXH7 462 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM69BQ5VUD6 431 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 LYPLAL1Q5VWZ2 237 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 KIAA0930Q6ICG6 404 aaPredicted RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 MRNIPQ6NTE8 343 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CDHR3Q6ZTQ4 885 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PRICKLE2Q7Z3G6 844 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 SDCCAG8Q86SQ7 713 aaPredicted RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 IGDCC3Q8IVU1 814 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 SLC22A15Q8IZD6 547 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 KRT222Q8N1A0 295 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 AGGF1Q8N302 714 aaeCLIP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 EIF1ADQ8N9N8 165 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 OR8K5Q8NH50 307 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 OR5K2Q8NHB8 316 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 APOBEC4Q8WW27 367 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 OR2A14Q96R47 310 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 TRIM56Q9BRZ2 755 aaKnown RBP12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 MENTQ9BUN1 341 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 TRIM4Q9C037 500 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 P2RY12Q9H244 342 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 ACTL8Q9H568 366 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 LATS2Q9NRM7 1088 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 CATSPERZQ9NTU4 200 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 PLAGL1Q9UM63 463 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 ASF1AQ9Y294 204 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM169AQ9Y6X4 670 aa12.27□□□□□ -0.45
SEC61A1-206ENST00000491668 FER1L5A0AVI2 2057 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 PCSK5Q92824 1860 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 C2orf74A8MZ97 194 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 C21orf140B9A014 251 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 QSOX1O00391 747 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 CD3EAPO15446 510 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 CPNE3O75131 537 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 MT-ND3P03897 115 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 CAPN1P07384 714 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 TUBBP07437 444 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 CHRM5P08912 532 aaPredicted RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 TNFRSF8P28908 595 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 PHBP35232 272 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 IL10RAQ13651 578 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 AARS2Q5JTZ9 985 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 TMTC4Q5T4D3 741 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 CYB5D1Q6P9G0 228 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 SPESP1Q6UW49 350 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 C3orf62Q6ZUJ4 267 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 PTRH1Q86Y79 214 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 TMEM126BQ8IUX1 230 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM20CQ8IXL6 584 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 GSPT2Q8IYD1 628 aaKnown RBP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 TBC1D21Q8IYX1 336 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 LINC01555Q8NAE3 123 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 GSDMBQ8TAX9 411 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 CALML6Q8TD86 181 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 ABHD17AQ96GS6 310 aa12.26□□□□□ -0.45
SEC61A1-206ENST00000491668 FAM117AQ9C073 453 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms