RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 ING2Q9H160 280 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 PCMTD2Q9NV79 361 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 TLK1Q9UKI8 766 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 TP53TG5Q9Y2B4 290 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF462Q96JM2 2506 aa15.98■□□□□ 0.15
PDLIM2-217ENST00000491330 ARGFXA6NJG6 315 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 IQCF5A8MTL0 148 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 PHF2O75151 1096 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 TMEM63AO94886 807 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 OGNP20774 298 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 ALAS2P22557 587 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 NMBRP28336 390 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 FMO4P31512 558 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 RORAP35398 523 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 COILP38432 576 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 FOLR3P41439 243 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 TERF1P54274 439 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 CRADDP78560 199 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 DHX34Q14147 1143 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 NCF4Q15080 339 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 FAM214AQ32MH5 1076 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 KIAA0930Q6ICG6 404 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 RHBDD2Q6NTF9 364 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 NEPROQ6NW34 567 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 TRIM73Q86UV7 250 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 KRT222Q8N1A0 295 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 TTC29Q8NA56 475 aaPredicted RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 MCUQ8NE86 351 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 SLCO2A1Q92959 643 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 INTS10Q9NVR2 710 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 IL1RAPL1Q9NZN1 696 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 PLAGL1Q9UM63 463 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 ZNF451Q9Y4E5 1061 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 PCDHGA9Q9Y5G4 932 aaKnown RBP15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 FAM169AQ9Y6X4 670 aa15.97■□□□□ 0.15
PDLIM2-217ENST00000491330 TARM1B6A8C7 271 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 VARSP26640 1264 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 HSD17B2P37059 387 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 ADARP55265 1226 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 RPS18P62269 152 aaKnown RBP15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 SEMA3AQ14563 771 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 SSPNQ14714 243 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 GRM7Q14831 915 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 PPP1R7Q15435 360 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 PTCHD3Q3KNS1 767 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 ANKRD20A4Q4UJ75 823 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 IRAK1BP1Q5VVH5 260 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 PCGF5Q86SE9 256 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 SLC38A9Q8NBW4 561 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 CLEC1AQ8NC01 280 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 MFSD3Q96ES6 412 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 P2RY12Q9H244 342 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 SYBUQ9NX95 663 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 SPHK1Q9NYA1 384 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 EURLQ9NYK6 297 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 SPATA7Q9P0W8 599 aa15.96■□□□□ 0.15
PDLIM2-217ENST00000491330 FAM237BA0A1B0GVD1 139 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 SMAPO00193 183 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 SRPX2O60687 465 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 DPM1O60762 260 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 CATP04040 527 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 ALPPP05187 535 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 MAGP20916 626 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 ATP5DP30049 168 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 KCNJ11Q14654 390 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 PRAMEF17Q5VTA0 474 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 PAPD7Q5XG87 772 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 SYDE1Q6ZW31 735 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 MCATQ8IVS2 390 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 ZNF655Q8N720 491 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 TM9SF4Q92544 642 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 NACC2Q96BF6 587 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 AKIRIN1Q9H9L7 192 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 TRMT1Q9NXH9 659 aaKnown RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 MARCH4Q9P2E8 410 aaPredicted RBP15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 MAD1L1Q9Y6D9 718 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 COMMD10Q9Y6G5 202 aa15.95■□□□□ 0.14
PDLIM2-217ENST00000491330 PABPN1LA6NDY0 278 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 NDC80O14777 642 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 VPS26AO75436 327 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 CCNDBP1O95273 360 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 C1orf105O95561 183 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 FURINP09958 794 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 ERVK-10P10266 1014 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 PKMP14618 531 aaKnown RBP15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 CMPK1P30085 196 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 OTX2P32243 289 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 TYSND1Q2T9J0 566 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 DEFB110Q30KQ9 67 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 NKAIN1Q4KMZ8 207 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 C1orf189Q5VU69 101 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 UGT3A1Q6NUS8 523 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 CNSTQ6PJW8 725 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 FIGLAQ6QHK4 219 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 CES3Q6UWW8 571 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 TMEM135Q86UB9 458 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 PALM2Q8IXS6 379 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 DNAJC22Q8N4W6 341 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 ZBTB2Q8N680 514 aa15.94■□□□□ 0.14
PDLIM2-217ENST00000491330 ZNF669Q96BR6 464 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms