RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 COILP38432 576 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-219ENST00000491183 PTGIRP43119 386 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 NCF4Q15080 339 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 CYP1B1Q16678 543 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 C1orf189Q5VU69 101 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 KIAA0930Q6ICG6 404 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-219ENST00000491183 MRNIPQ6NTE8 343 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 RHBDD2Q6NTF9 364 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 ASB18Q6ZVZ8 466 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 OTOAQ7RTW8 1153 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 SDCCAG8Q86SQ7 713 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-219ENST00000491183 TAX1BP1Q86VP1 789 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 OTUD6BQ8N6M0 293 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 DPH2Q9BQC3 489 aaPredicted RBP17.33■□□□□ 0.36
HMGN1-219ENST00000491183 ING2Q9H160 280 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 GALPQ9UBC7 116 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 PLCL2Q9UPR0 1127 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 RUVBL2Q9Y230 463 aaKnown RBP17.33■□□□□ 0.36
HMGN1-219ENST00000491183 AP1M2Q9Y6Q5 423 aa17.33■□□□□ 0.36
HMGN1-219ENST00000491183 KRT87PA6NCN2 255 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 RASGRF2O14827 1237 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 NIPSNAP2O75323 286 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 KLF7O75840 302 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-219ENST00000491183 AGXTP21549 392 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 CCL11P51671 97 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 SARNPP82979 210 aaKnown RBP17.32■□□□□ 0.36
HMGN1-219ENST00000491183 KLRB1Q12918 225 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 GBX1Q14549 363 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 IGFBP7Q16270 282 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 CENPUQ71F23 418 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 ZBTB2Q8N680 514 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 ZNF655Q8N720 491 aaPredicted RBP17.32■□□□□ 0.36
HMGN1-219ENST00000491183 RAD51AP1Q96B01 352 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 TCF12Q99081 682 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 MLXIPLQ9NP71 852 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 EURLQ9NYK6 297 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 IL1RAPL1Q9NZN1 696 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 DHCR7Q9UBM7 475 aaKnown RBP17.32■□□□□ 0.36
HMGN1-219ENST00000491183 SLC39A10Q9ULF5 831 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 CRYL1Q9Y2S2 319 aa17.32■□□□□ 0.36
HMGN1-219ENST00000491183 ZSCAN9O15535 394 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-219ENST00000491183 S1PR4O95977 384 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 BDKRB1P46663 353 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 ADARP55265 1226 aaKnown RBP17.31■□□□□ 0.36
HMGN1-219ENST00000491183 ANKRD20A4Q4UJ75 823 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 MLIPQ5VWP3 458 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 FCRL6Q6DN72 434 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 NEPROQ6NW34 567 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 TLDC1Q6P9B6 456 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 CNSTQ6PJW8 725 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 CCDC137Q6PK04 289 aaKnown RBP17.31■□□□□ 0.36
HMGN1-219ENST00000491183 MCATQ8IVS2 390 aaKnown RBP17.31■□□□□ 0.36
HMGN1-219ENST00000491183 SLC35F6Q8N357 371 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 MCUQ8NE86 351 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 GSDMBQ8TAX9 411 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 DENND1AQ8TEH3 1009 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 COG1Q8WTW3 980 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 SLC22A18Q96BI1 424 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 FAM136AQ96C01 138 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 ACSS2Q9NR19 701 aa17.31■□□□□ 0.36
HMGN1-219ENST00000491183 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.31■□□□□ 0.36
HMGN1-219ENST00000491183 FAM237BA0A1B0GVD1 139 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 C9J4A7 227 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 GOLGA8MH3BSY2 632 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 MATN4O95460 622 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 ESR1P03372 595 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 F7P08709 466 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 MLNP12872 115 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 OGNP20774 298 aaKnown RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 GRIA3P42263 894 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 GCGRP47871 477 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 DCDP81605 110 aaKnown RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 FOXK1P85037 733 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 SF1Q15637 639 aaKnown RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 RNF187Q5TA31 235 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 ARMC3Q5W041 872 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 CASC4Q6P4E1 433 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 TTC23LQ6PF05 361 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 FIGLAQ6QHK4 219 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 CILP2Q8IUL8 1156 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 SPNS2Q8IVW8 549 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 TMEM151BQ8IW70 566 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 AGGF1Q8N302 714 aaeCLIP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 TEX19Q8NA77 164 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 PROKR1Q8TCW9 393 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 SKA2Q8WVK7 121 aaPredicted RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 SLC25A23Q9BV35 468 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 SLC22A11Q9NSA0 550 aa17.3■□□□□ 0.36
HMGN1-219ENST00000491183 TSR3Q9UJK0 312 aaKnown RBP17.3■□□□□ 0.36
HMGN1-219ENST00000491183 ZCWPW2A0A1B0GU75 182 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 MAGEB16A2A368 324 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 SDR42E2A6NKP2 422 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 CNOT3O75175 753 aaKnown RBP17.29■□□□□ 0.36
HMGN1-219ENST00000491183 CEACAM4O75871 244 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 ATXN8OSP0DMR3 200 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 PKMP14618 531 aaKnown RBP17.29■□□□□ 0.36
HMGN1-219ENST00000491183 PAMP19021 973 aa17.29■□□□□ 0.36
HMGN1-219ENST00000491183 CHRM3P20309 590 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms