RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 UBL7Q96S82 380 aaPredicted RBP7.41□□□□□ -1.22
CLDN1-202ENST00000490800 ABCG8Q9H221 673 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 P2RY12Q9H244 342 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 ASB8Q9H765 288 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 ASCL3Q9NQ33 180 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 RAD18Q9NS91 495 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 PSD3Q9NYI0 1048 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.41□□□□□ -1.22
CLDN1-202ENST00000490800 NFKBIL1Q9UBC1 381 aaPredicted RBP7.41□□□□□ -1.22
CLDN1-202ENST00000490800 CD84Q9UIB8 345 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 CRLS1Q9UJA2 301 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 MOSPD1Q9UJG1 213 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 TMPRSS11EQ9UL52 423 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 EMCNQ9ULC0 261 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 GRID1Q9ULK0 1009 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 MED16Q9Y2X0 877 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 VWA7Q9Y334 891 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 DGKBQ9Y6T7 804 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 BPTFQ12830 3046 aa7.41□□□□□ -1.22
CLDN1-202ENST00000490800 LRRK1Q38SD2 2015 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 A0A087X1B8 175 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 A0A1W2PQM1 296 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 UBA6A0AVT1 1052 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 NTN3O00634 580 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TNFRSF10CO14798 259 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PFDN6O15212 129 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 KLK10O43240 276 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PLIN3O60664 434 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 GLRA3O75311 464 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TNFSF15O95150 251 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 FUCA1P04066 466 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PROCP04070 461 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 GSTA1P08263 222 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 HOXC4P09017 264 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PKMP14618 531 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 RPS3P23396 243 aaKnown RBP eCLIP7.4□□□□□ -1.221e-7■■■□□ 16.3
CLDN1-202ENST00000490800 ACRV1P26436 265 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PDX1P52945 283 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 SLC12A2P55011 1212 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 ADARP55265 1226 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 KIAA1024LP59773 190 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 GABPB1Q06547 395 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 DLG1Q12959 904 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 SPIDRQ14159 915 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TUBB8Q3ZCM7 444 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 ATP13A5Q4VNC0 1218 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TAF1BQ53T94 588 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 RPS26P11Q5JNZ5 115 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 HENMT1Q5T8I9 393 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 HHATQ5VTY9 493 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 LYPLAL1Q5VWZ2 237 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 LYPD4Q6UWN0 246 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TMEM207Q6UWW9 146 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 C20orf204Q6ZNR8 217 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 RAPH1Q70E73 1250 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 B3GNT8Q7Z7M8 397 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PIM3Q86V86 326 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 RAVER1Q8IY67 606 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 NRSN1Q8IZ57 195 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 CENPLQ8N0S6 344 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 NXPE1Q8N323 547 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TRAM1L1Q8N609 369 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 Q8N9G6 341 aaPredicted RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 GPR156Q8NFN8 814 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 CCL4L1Q8NHW4 92 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 WDR36Q8NI36 951 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 WDR48Q8TAF3 677 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 DTX3LQ8TDB6 740 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 KCTD4Q8WVF5 259 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 KCNE4Q8WWG9 221 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 SCAMP4Q969E2 229 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 ULK4Q96C45 1275 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 DTD2Q96FN9 168 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TSPAN17Q96FV3 270 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 GPR78Q96P69 363 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PAIP2Q9BPZ3 127 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 RIOK2Q9BVS4 552 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 SPATA16Q9BXB7 569 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 IQCGQ9H095 443 aaKnown RBP7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TMEM168Q9H0V1 697 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 CDH19Q9H159 772 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 LRRN3Q9H3W5 708 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 DPEP2Q9H4A9 486 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 FAM83DQ9H4H8 585 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 CCDC134Q9H6E4 229 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 CPNE5Q9HCH3 593 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 FGF22Q9HCT0 170 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 THSD1Q9NS62 852 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 DCDC2Q9UHG0 476 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 TLK1Q9UKI8 766 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 ACOT9Q9Y305 439 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PCDHGA8Q9Y5G5 932 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PRSS21Q9Y6M0 314 aa7.4□□□□□ -1.22
CLDN1-202ENST00000490800 PIKFYVEQ9Y2I7 2098 aa7.39□□□□□ -1.23
CLDN1-202ENST00000490800 IGLV3-16A0A075B6K0 115 aa7.39□□□□□ -1.23
CLDN1-202ENST00000490800 CCDC187A0A096LP49 1063 aa7.39□□□□□ -1.23
CLDN1-202ENST00000490800 TEX51A0A1B0GUA7 166 aa7.39□□□□□ -1.23
CLDN1-202ENST00000490800 AGRPO00253 132 aa7.39□□□□□ -1.23
CLDN1-202ENST00000490800 PRMT5O14744 637 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms