RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 BDKRB1P46663 353 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 FNTAP49354 379 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 FAM198BQ6UWH4 519 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 CENPUQ71F23 418 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 FAM136AQ96C01 138 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 NLNQ9BYT8 704 aa30.23■■■□□ 2.43
LDB1-204ENST00000490751 SPRTNQ9H040 489 aaPredicted RBP30.23■■■□□ 2.43
LDB1-204ENST00000490751 MAGEB16A2A368 324 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 H3BMH7 237 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 CES2O00748 559 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 ZIC2O95409 532 aaPredicted RBP30.22■■■□□ 2.43
LDB1-204ENST00000490751 C1orf105O95561 183 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 MAGP20916 626 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 PMS2P54278 862 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 ADARP55265 1226 aaKnown RBP30.22■■■□□ 2.43
LDB1-204ENST00000490751 CNSTQ6PJW8 725 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 CILP2Q8IUL8 1156 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 NAT8LQ8N9F0 302 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 RAD51AP1Q96B01 352 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 SLC22A18Q96BI1 424 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 TRIM4Q9C037 500 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 TSR3Q9UJK0 312 aaKnown RBP30.22■■■□□ 2.43
LDB1-204ENST00000490751 SNX7Q9UNH6 387 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 KLHL20Q9Y2M5 609 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 MRFAP1Q9Y605 127 aa30.22■■■□□ 2.43
LDB1-204ENST00000490751 FER1L5A0AVI2 2057 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 RFPL1O75677 317 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 S1PR4O95977 384 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 CAPN1P07384 714 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 CTSBP07858 339 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 DNAJC22Q8N4W6 341 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 THAP4Q8WY91 577 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 FOPNLQ96NB1 174 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 RAB11FIP5Q9BXF6 653 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 AP1M2Q9Y6Q5 423 aa30.21■■■□□ 2.43
LDB1-204ENST00000490751 MKRN2OSH3BPM6 223 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 CHRM3P20309 590 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 MAGEA3P43357 314 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 CCSMST1Q4G0I0 132 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 LACTB2Q53H82 288 aaPredicted RBP30.2■■■□□ 2.43
LDB1-204ENST00000490751 ZNF385CQ66K41 422 aaPredicted RBP30.2■■■□□ 2.43
LDB1-204ENST00000490751 ZNF470Q6ECI4 717 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 DPH2Q9BQC3 489 aaPredicted RBP30.2■■■□□ 2.43
LDB1-204ENST00000490751 INTS10Q9NVR2 710 aaKnown RBP30.2■■■□□ 2.43
LDB1-204ENST00000490751 IRAK4Q9NWZ3 460 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 CAMSAP3Q9P1Y5 1249 aaPredicted RBP30.2■■■□□ 2.43
LDB1-204ENST00000490751 TCFL5Q9UL49 500 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 PLCL2Q9UPR0 1127 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 VPS9D1Q9Y2B5 631 aa30.2■■■□□ 2.43
LDB1-204ENST00000490751 SEC16AO15027 2179 aa30.2■■■□□ 2.42
LDB1-204ENST00000490751 ZCWPW2A0A1B0GU75 182 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 KRT87PA6NCN2 255 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 PKMP14618 531 aaKnown RBP30.19■■■□□ 2.42
LDB1-204ENST00000490751 AGXTP21549 392 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 THOC5Q13769 683 aaKnown RBP30.19■■■□□ 2.42
LDB1-204ENST00000490751 GBX1Q14549 363 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 NCF4Q15080 339 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 PPP1R7Q15435 360 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 FAM69BQ5VUD6 431 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 APLFQ8IW19 511 aaPredicted RBP30.19■■■□□ 2.42
LDB1-204ENST00000490751 PPIL6Q8IXY8 311 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 AGGF1Q8N302 714 aaeCLIP30.19■■■□□ 2.421e-7■■■■□ 20.7
LDB1-204ENST00000490751 GALPQ9UBC7 116 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 TP53TG5Q9Y2B4 290 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 MAD1L1Q9Y6D9 718 aa30.19■■■□□ 2.42
LDB1-204ENST00000490751 C9J4A7 227 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 E5RI56 91 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 ZSCAN9O15535 394 aaPredicted RBP30.18■■■□□ 2.42
LDB1-204ENST00000490751 DNAJB5O75953 348 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 F7P08709 466 aaPredicted RBP30.18■■■□□ 2.42
LDB1-204ENST00000490751 ATP5DP30049 168 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 CCNFP41002 786 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 SF1Q15637 639 aaKnown RBP30.18■■■□□ 2.42
LDB1-204ENST00000490751 RHBDD2Q6NTF9 364 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 DENND6AQ8IWF6 608 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 RAB42Q8N4Z0 105 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 ZBTB2Q8N680 514 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 ZNF655Q8N720 491 aaPredicted RBP30.18■■■□□ 2.42
LDB1-204ENST00000490751 TRIM55Q9BYV6 548 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 INTS7Q9NVH2 962 aaKnown RBP30.18■■■□□ 2.42
LDB1-204ENST00000490751 TLK1Q9UKI8 766 aa30.18■■■□□ 2.42
LDB1-204ENST00000490751 CTAGE9A4FU28 777 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 CBSLP0DN79 551 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 NR1D1P20393 614 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 CBSP35520 551 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 C1orf189Q5VU69 101 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 CPZQ66K79 652 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 TLDC1Q6P9B6 456 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 MAGEC3Q8TD91 643 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 ADAMTS17Q8TE56 1095 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 SIGLEC10Q96LC7 697 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 DDX47Q9H0S4 455 aaKnown RBP30.17■■■□□ 2.42
LDB1-204ENST00000490751 FBXO6Q9NRD1 293 aaPredicted RBP30.17■■■□□ 2.42
LDB1-204ENST00000490751 EURLQ9NYK6 297 aa30.17■■■□□ 2.42
LDB1-204ENST00000490751 USP27XA6NNY8 438 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 PRICKLE3O43900 615 aaPredicted RBP30.16■■■□□ 2.42
LDB1-204ENST00000490751 USP1O94782 785 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 MATN4O95460 622 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 CHAF1BQ13112 559 aa30.16■■■□□ 2.42
LDB1-204ENST00000490751 CTBP1Q13363 440 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms