RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CASC4Q6P4E1 433 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 TLDC1Q6P9B6 456 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 FAM199XQ6PEV8 388 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 SPESP1Q6UW49 350 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 LDB1Q86U70 411 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 SYTL1Q8IYJ3 562 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 ENDOVQ8N8Q3 282 aaKnown RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 OR52E1Q8NGJ3 308 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 PROKR1Q8TCW9 393 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 ZNF592Q92610 1267 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 SLC22A18Q96BI1 424 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 FER1L6-AS2Q96M78 137 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 SERPINB12Q96P63 405 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 TRAPPC9Q96Q05 1148 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 SLC29A3Q9BZD2 475 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 TRIM31Q9BZY9 425 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 XAB2Q9HCS7 855 aaKnown RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 ARGLU1Q9NWB6 273 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 ACTR10Q9NZ32 417 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 C5AR2Q9P296 337 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 MARCH4Q9P2E8 410 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 GPN3Q9UHW5 284 aaPredicted RBP10.02□□□□□ -0.81
TTC28-207ENST00000490475 SOX13Q9UN79 622 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 ASF1AQ9Y294 204 aa10.02□□□□□ -0.81
TTC28-207ENST00000490475 COL12A1Q99715 3063 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 MAGEB16A2A368 324 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ARGFXA6NJG6 315 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 CD3EAPO15446 510 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 CEACAM4O75871 244 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 URI1O94763 535 aaPredicted RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 IPO13O94829 963 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 VAPBO95292 243 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 FKBP9O95302 570 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 PIM1P11309 404 aaPredicted RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 ST6GAL1P15907 406 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ARNTP27540 789 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 MAGEA3P43357 314 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 CCL11P51671 97 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 RPS18P62269 152 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 C2orf54Q08AI8 447 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 SSPNQ14714 243 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 KIR2DS3Q14952 304 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 NCF4Q15080 339 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ANKRD20A4Q4UJ75 823 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ZNF658BQ4V348 819 aaPredicted RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 MSS51Q4VC12 460 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 SYTL3Q4VX76 610 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 FASTKD1Q53R41 847 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 DNAJC21Q5F1R6 531 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 AARS2Q5JTZ9 985 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 AFTPHQ6ULP2 937 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 SYDE1Q6ZW31 735 aaPredicted RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 TMEM135Q86UB9 458 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ADGRF3Q8IZF5 1079 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 LILRA3Q8N6C8 439 aaPredicted RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 C19orf47Q8N9M1 422 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 OR1L3Q8NH93 324 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 OR5K2Q8NHB8 316 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 CPT1CQ8TCG5 803 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ADAMTS17Q8TE56 1095 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 TM9SF4Q92544 642 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ELMO1Q92556 727 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 DLG3Q92796 817 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 SGSM3Q96HU1 749 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 VPS50Q96JG6 964 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 SIGLEC10Q96LC7 697 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 PWWP2AQ96N64 755 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 RUNDC3BQ96NL0 473 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 HGH1Q9BTY7 390 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 MRM3Q9HC36 420 aaKnown RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 TXLNGQ9NUQ3 528 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 PCMTD2Q9NV79 361 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 CUEDC1Q9NWM3 386 aaPredicted RBP10.01□□□□□ -0.81
TTC28-207ENST00000490475 GPR83Q9NYM4 423 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 PLAAQ9Y263 795 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 SNX24Q9Y343 169 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 MAD1L1Q9Y6D9 718 aa10.01□□□□□ -0.81
TTC28-207ENST00000490475 ANKRD12Q6UB98 2062 aa10□□□□□ -0.81
TTC28-207ENST00000490475 PRRC2CQ9Y520 2896 aaKnown RBP10□□□□□ -0.81
TTC28-207ENST00000490475 A0A0J9YY10 115 aa10□□□□□ -0.81
TTC28-207ENST00000490475 BTN3A3O00478 584 aa10□□□□□ -0.81
TTC28-207ENST00000490475 PEX12O00623 359 aa10□□□□□ -0.81
TTC28-207ENST00000490475 ZNF749O43361 778 aa10□□□□□ -0.81
TTC28-207ENST00000490475 BANF1O75531 89 aa10□□□□□ -0.81
TTC28-207ENST00000490475 OR2B3O76000 313 aa10□□□□□ -0.81
TTC28-207ENST00000490475 TUBBP07437 444 aa10□□□□□ -0.81
TTC28-207ENST00000490475 H2AFXP16104 143 aaPredicted RBP10□□□□□ -0.81
TTC28-207ENST00000490475 NR1D1P20393 614 aa10□□□□□ -0.81
TTC28-207ENST00000490475 PDHA2P29803 388 aa10□□□□□ -0.81
TTC28-207ENST00000490475 ARCN1P48444 511 aaKnown RBP10□□□□□ -0.81
TTC28-207ENST00000490475 ARSFP54793 590 aa10□□□□□ -0.81
TTC28-207ENST00000490475 ABRQ12979 859 aa10□□□□□ -0.81
TTC28-207ENST00000490475 IL10RAQ13651 578 aa10□□□□□ -0.81
TTC28-207ENST00000490475 DHX34Q14147 1143 aaKnown RBP10□□□□□ -0.81
TTC28-207ENST00000490475 SLC5A12Q1EHB4 618 aa10□□□□□ -0.81
TTC28-207ENST00000490475 HP1BP3Q5SSJ5 553 aaPredicted RBP10□□□□□ -0.81
TTC28-207ENST00000490475 FHL5Q5TD97 284 aa10□□□□□ -0.81
TTC28-207ENST00000490475 VWA5B1Q5TIE3 1220 aa10□□□□□ -0.81
TTC28-207ENST00000490475 RHBDD2Q6NTF9 364 aa10□□□□□ -0.81
TTC28-207ENST00000490475 TTC23LQ6PF05 361 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms