RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 TCEAL3Q969E4 200 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 EGFL8Q99944 293 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 MECRQ9BV79 373 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 SMOC1Q9H4F8 434 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 MLXIPLQ9NP71 852 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 WWOXQ9NZC7 414 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 OR6C2Q9NZP2 312 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 OGFRQ9NZT2 677 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 ZNF292O60281 2723 aa12.97□□□□□ -0.33
TRAIP-210ENST00000489948 GOLGA4Q13439 2230 aaKnown RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 NCF1BA6NI72 391 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 NCF1CA8MVU1 366 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 TAPBPO15533 448 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 NPHS1O60500 1241 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 SNUPNO95149 360 aaKnown RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 GUCA1CO95843 209 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 SERPINE1P05121 402 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 NCF1P14598 390 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 IMPDH1P20839 514 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 GRK2P25098 689 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 MDH1P40925 334 aaKnown RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 PIK3CGP48736 1102 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 ATXN3P54252 364 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 PNLIPRP1P54315 467 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 TBPL1P62380 186 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 GPR18Q14330 331 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 KRT33BQ14525 404 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 CCDC6Q16204 474 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 CSRP2Q16527 193 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 AGTRAPQ6RW13 159 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 FRMD7Q6ZUT3 714 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 LRRC56Q8IYG6 542 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 ARL14Q8N4G2 192 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 OR6C4Q8NGE1 309 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 OR2L8Q8NGY9 312 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 ZNF483Q8TF39 744 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 CKAP2Q8WWK9 683 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 SH3KBP1Q96B97 665 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 PHF21BQ96EK2 531 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 MAGEB18Q96M61 343 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 TRMOQ9BU70 441 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 SGPP1Q9BX95 441 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.96□□□□□ -0.33
TRAIP-210ENST00000489948 LNPEPQ9UIQ6 1025 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 PCTPQ9UKL6 214 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
TRAIP-210ENST00000489948 KRT87PA6NCN2 255 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 TMEM114B3SHH9 223 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 E7ENX8 843 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 K7EPI3 171 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 E2F3O00716 465 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 NUDT21O43809 227 aaKnown RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 STK16O75716 305 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 PNLIPP16233 465 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 EEF1DP29692 281 aaKnown RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 EPHA4P54764 986 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 MAZP56270 477 aaKnown RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 TAP2Q03519 686 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 GALNT1Q10472 559 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 PRKG2Q13237 762 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 SLC14A1Q13336 389 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 ZXDCQ2QGD7 858 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 TMEM26Q6ZUK4 368 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 SFTPA2Q8IWL1 248 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 SLC35F3Q8IY50 421 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 PAIP2Q9BPZ3 127 aaKnown RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 GTPBP2Q9BX10 602 aaKnown RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 PCBD2Q9H0N5 130 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 GSTO2Q9H4Y5 243 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 CCDC177Q9NQR7 707 aaPredicted RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 SEMA4GQ9NTN9 838 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 NCDNQ9UBB6 729 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 STK38LQ9Y2H1 464 aa12.95□□□□□ -0.34
TRAIP-210ENST00000489948 TDRKHQ9Y2W6 561 aaKnown RBP12.95□□□□□ -0.34
TRAIP-210ENST00000489948 TRIM38O00635 465 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 FLRT2O43155 660 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 SNNO75324 88 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-210ENST00000489948 SIX3O95343 332 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-210ENST00000489948 GLB1P16278 677 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 BGNP21810 368 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 GRK6P43250 576 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 GPR3P46089 330 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 HSPA7P48741 367 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 AGTR2P50052 363 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 NAGLUP54802 743 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 PCDH1Q08174 1060 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 RCN2Q14257 317 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 SUZ12Q15022 739 aaKnown RBP12.94□□□□□ -0.34
TRAIP-210ENST00000489948 CHI3L2Q15782 390 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 PTCHD3Q3KNS1 767 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 TUBB8Q3ZCM7 444 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 UNC50Q53HI1 259 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 ATG16L1Q676U5 607 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 CAPN13Q6MZZ7 669 aaPredicted RBP12.94□□□□□ -0.34
TRAIP-210ENST00000489948 AMIGO1Q86WK6 493 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 GATAD2AQ86YP4 633 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 SYTL1Q8IYJ3 562 aa12.94□□□□□ -0.34
TRAIP-210ENST00000489948 LINC01555Q8NAE3 123 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms