RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 FANCEQ9HB96 536 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 SPATA7Q9P0W8 599 aa16.77■□□□□ 0.27
MDC1-206ENST00000489540 TSR3Q9UJK0 312 aaKnown RBP16.77■□□□□ 0.27
MDC1-206ENST00000489540 PKD1L2Q7Z442 2459 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 A0A0J9YY10 115 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 ZBTB14O43829 449 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 RAD1O60671 282 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 HSD17B2P37059 387 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 TIAL1Q01085 375 aaKnown RBP eCLIP16.76■□□□□ 0.27
MDC1-206ENST00000489540 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CUL1Q13616 776 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 MAP7Q14244 749 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 MANEAQ5SRI9 462 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CCDC81Q6ZN84 652 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CPNE9Q8IYJ1 553 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CACNA2D3Q8IZS8 1091 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 IL22RA1Q8N6P7 574 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CEP112Q8N8E3 955 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 GPATCH11Q8N954 259 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 LINC01555Q8NAE3 123 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 FBXO15Q8NCQ5 510 aaPredicted RBP16.76■□□□□ 0.27
MDC1-206ENST00000489540 FLVCR1-AS1Q8TAF5 88 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 HMGCLL1Q8TB92 370 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CDKL2Q92772 493 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 FAM129AQ9BZQ8 928 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 PRORYQ9H606 182 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 SLC17A6Q9P2U8 582 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 CIDEBQ9UHD4 219 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 LHX6Q9UPM6 363 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 AHCTF1Q8WYP5 2266 aa16.76■□□□□ 0.27
MDC1-206ENST00000489540 ARHGEF33A8MVX0 844 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 GFYI3L273 518 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 MYO1CO00159 1063 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 FKBP9O95302 570 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 DLGAP3O95886 979 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 MCM3P25205 808 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 SSTR1P30872 391 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 CDKN2DP55273 166 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 ARHGAP19Q14CB8 494 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 CYP2A13Q16696 494 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 CCSMST1Q4G0I0 132 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 RBM20Q5T481 1227 aaKnown RBP16.75■□□□□ 0.27
MDC1-206ENST00000489540 HECTD2Q5U5R9 776 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 FAM45BPQ6NSW5 357 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 C6orf15Q6UXA7 325 aaPredicted RBP16.75■□□□□ 0.27
MDC1-206ENST00000489540 STRA8Q7Z7C7 330 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 CCDC25Q86WR0 208 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 C2orf73Q8N5S3 287 aaPredicted RBP16.75■□□□□ 0.27
MDC1-206ENST00000489540 ESX1Q8N693 406 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 C19orf47Q8N9M1 422 aaKnown RBP16.75■□□□□ 0.27
MDC1-206ENST00000489540 FAM45AQ8TCE6 357 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 ZNF501Q96CX3 271 aaPredicted RBP16.75■□□□□ 0.27
MDC1-206ENST00000489540 SERTAD3Q9UJW9 196 aa16.75■□□□□ 0.27
MDC1-206ENST00000489540 ESYT3A0FGR9 886 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 ZNF839A8K0R7 811 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 MT-ND3P03897 115 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 PVRP15151 417 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 PEBP1P30086 187 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 MAGEA4P43358 317 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 CXADRP78310 365 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 VAC14Q08AM6 782 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 PDAP1Q13442 181 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 SF1Q15637 639 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 GPR19Q15760 415 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 PWWP2BQ6NUJ5 590 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 PAQR3Q6TCH7 311 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 CAPN12Q6ZSI9 719 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 CEP128Q6ZU80 1094 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 TIPARPQ7Z3E1 657 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 TRIM73Q86UV7 250 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 ZC3HC1Q86WB0 502 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 NOA1Q8NC60 698 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 DENND1AQ8TEH3 1009 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 EEF1AKMT1Q8WVE0 214 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 SNRNP27Q8WVK2 155 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 KLHL25Q9H0H3 589 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 ZDHHC18Q9NUE0 388 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 INTS7Q9NVH2 962 aaKnown RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 PSAT1Q9Y617 370 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 CELSR3Q9NYQ7 3312 aa16.74■□□□□ 0.27
MDC1-206ENST00000489540 KMT2BQ9UMN6 2715 aaPredicted RBP16.74■□□□□ 0.27
MDC1-206ENST00000489540 K7ENP7 123 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 PRICKLE3O43900 615 aaPredicted RBP16.73■□□□□ 0.27
MDC1-206ENST00000489540 KIAA0754O94854 1291 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 OAS2P29728 719 aaKnown RBP16.73■□□□□ 0.27
MDC1-206ENST00000489540 IL2P60568 153 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 ABHD18Q0P651 414 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 INO80CQ6PI98 192 aaPredicted RBP16.73■□□□□ 0.27
MDC1-206ENST00000489540 GPR155Q7Z3F1 870 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 PIWIL4Q7Z3Z4 852 aaKnown RBP16.73■□□□□ 0.27
MDC1-206ENST00000489540 MYO1HQ8N1T3 1032 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 SMPDL3AQ92484 453 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 PKP4Q99569 1192 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 EFHD1Q9BUP0 239 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 TSPYL1Q9H0U9 437 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 CPNE5Q9HCH3 593 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 TXNDC16Q9P2K2 825 aa16.73■□□□□ 0.27
MDC1-206ENST00000489540 TCRBV9S1A1TA0A576 114 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms