RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 NKAIN1Q4KMZ8 207 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CBWD6Q4V339 395 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CBWD3Q5JTY5 395 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CBWD5Q5RIA9 395 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 RAET1GQ6H3X3 334 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 RTL6Q6ICC9 239 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 B3GNT6Q6ZMB0 384 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 DPPA4Q7L190 304 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 BEND5Q7L4P6 421 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 ENOSF1Q7L5Y1 443 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 IRF2BP2Q7Z5L9 587 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 TRIM74Q86UV6 250 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 KIF18BQ86Y91 864 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 RBM12BQ8IXT5 1001 aaKnown RBP7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 ZNF683Q8IZ20 524 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CARFQ8N187 725 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 FAM98AQ8NCA5 519 aaKnown RBP7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 ZFPM2Q8WW38 1151 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CTNNBL1Q8WYA6 563 aaPredicted RBP7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 PGAP3Q96FM1 320 aaPredicted RBP7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CALR3Q96L12 384 aaKnown RBP7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 DACH2Q96NX9 599 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 OLFM1Q99784 485 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 CXorf56Q9H5V9 222 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 RETREG1Q9H6L5 497 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 WDR54Q9H977 334 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 TMEM8AQ9HCN3 771 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 UBE2TQ9NPD8 197 aaPredicted RBP7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 SLC22A11Q9NSA0 550 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 ZNF212Q9UDV6 495 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 SERTAD3Q9UJW9 196 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 SNX12Q9UMY4 172 aa7.12□□□□□ -1.27
EXOSC3-206ENST00000489414 ARHGAP21Q5T5U3 1957 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 A0A0A6YYK5 440 aaPredicted RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 CCDC151A5D8V7 595 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 TGFBR3LH3BV60 316 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 ATP8B1O43520 1251 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 TMCC2O75069 709 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 IGSF6O95976 241 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 SETSIPP0DME0 302 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 H2AFXP16104 143 aaPredicted RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 ZNF16P17020 682 aaPredicted RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 CCR1P32246 355 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 USP8P40818 1118 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 CLCNKAP51800 687 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 RAD23BP54727 409 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 GEMIN4P57678 1058 aaKnown RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 OCRLQ01968 901 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 IHHQ14623 411 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 GLIPR1L2Q4G1C9 344 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 GARNL3Q5VVW2 1013 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 ARHGAP11AQ6P4F7 1023 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 NEK10Q6ZWH5 1172 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 ZNF571Q7Z3V5 609 aaPredicted RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 GALNTL5Q7Z4T8 443 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 PHYKPLQ8IUZ5 450 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 TMEM178AQ8NBL3 297 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 FBXL13Q8NEE6 735 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 FAM216AQ8WUB2 273 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 CAPZA3Q96KX2 299 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 PPM1MQ96MI6 270 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 SELENOOQ9BVL4 669 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 ACBD3Q9H3P7 528 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 SUV39H2Q9H5I1 410 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 APOBEC3GQ9HC16 384 aaKnown RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 MED29Q9NX70 200 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 PSD3Q9NYI0 1048 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 TFR2Q9UP52 801 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 EIF3LQ9Y262 564 aaKnown RBP7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 CAPN6Q9Y6Q1 641 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 DUSP10Q9Y6W6 482 aa7.11□□□□□ -1.27
EXOSC3-206ENST00000489414 A0A0A6YYJ9 748 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GOLGA6CA6NDK9 693 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GOLGA6BA6NDN3 693 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 LRRIQ3A6PVS8 624 aaPredicted RBP7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 SLCO1B7G3V0H7 640 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 H3BMH7 237 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 SIAH2O43255 324 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PALMO75781 387 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 CELA2AP08217 269 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GOLGA6DP0CG33 693 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 CCDC166P0CW27 439 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 ACPPP15309 386 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 TFEBP19484 476 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 HNF1AP20823 631 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 RGS7P49802 495 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 BPIFB4P59827 614 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GNA12Q03113 381 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 ZNF33BQ06732 778 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PPP3CAQ08209 521 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 RPS6KA1Q15418 735 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GXYLT1Q4G148 440 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 DPY19L2P1Q6NXN4 242 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 PMF1Q6P1K2 205 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 GJB7Q6PEY0 223 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 KLHL35Q6PF15 583 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 ADAMTSL4Q6UY14 1074 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 RIPOR1Q6ZS17 1223 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 TRIM46Q7Z4K8 759 aa7.1□□□□□ -1.27
EXOSC3-206ENST00000489414 RHOT2Q8IXI1 618 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms