RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 ZNF655Q8N720 491 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-206ENST00000489142 TCTN2Q96GX1 697 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 NAP1L3Q99457 506 aaPredicted RBP13.51□□□□□ -0.25
VTI1A-206ENST00000489142 GPR87Q9BY21 358 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 TUBD1Q9UJT1 453 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 SNX12Q9UMY4 172 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 MAD1L1Q9Y6D9 718 aa13.51□□□□□ -0.25
VTI1A-206ENST00000489142 SDR42E2A6NKP2 422 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 H3BMH7 237 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 RASGRF2O14827 1237 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 KIF5CO60282 957 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 BANF1O75531 89 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 C1orf105O95561 183 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CAPN1P07384 714 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 MSL3P1P0C860 447 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CBSLP0DN79 551 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CHRM3P20309 590 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CD9P21926 228 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CBSP35520 551 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 GRIA3P42263 894 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 PMS2P54278 862 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CTBP1Q13363 440 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 SLC9A5Q14940 896 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 PPP1R7Q15435 360 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 ANKRD20A4Q4UJ75 823 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 LACTB2Q53H82 288 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-206ENST00000489142 IZUMO3Q5VZ72 239 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 ATG14Q6ZNE5 492 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 SYVN1Q86TM6 617 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 LRRC6Q86X45 466 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CILP2Q8IUL8 1156 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 OR2L8Q8NGY9 312 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 ACTRT1Q8TDG2 376 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CAPZA3Q96KX2 299 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 LRFN5Q96NI6 719 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
VTI1A-206ENST00000489142 XAB2Q9HCS7 855 aaKnown RBP13.5□□□□□ -0.25
VTI1A-206ENST00000489142 FBXO6Q9NRD1 293 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-206ENST00000489142 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
VTI1A-206ENST00000489142 DHCR7Q9UBM7 475 aaKnown RBP13.5□□□□□ -0.25
VTI1A-206ENST00000489142 TLK1Q9UKI8 766 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 SLC39A10Q9ULF5 831 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 SNX7Q9UNH6 387 aa13.5□□□□□ -0.25
VTI1A-206ENST00000489142 SEC16AO15027 2179 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 GOLGA6L10A0A0M3HER8 536 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 ZCWPW2A0A1B0GU75 182 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 FAM237BA0A1B0GVD1 139 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 CTAGE9A4FU28 777 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 ARGFXA6NJG6 315 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 NRP2O60462 931 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 RFPL1O75677 317 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 S1PR4O95977 384 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 PAMP19021 973 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 OGNP20774 298 aaKnown RBP13.49□□□□□ -0.25
VTI1A-206ENST00000489142 SLC1A2P43004 574 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 PTGIRP43119 386 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 CUL1Q13616 776 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 ACSBG2Q5FVE4 666 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 RNF187Q5TA31 235 aaPredicted RBP13.49□□□□□ -0.25
VTI1A-206ENST00000489142 ZNF385CQ66K41 422 aaPredicted RBP13.49□□□□□ -0.25
VTI1A-206ENST00000489142 TMEM151BQ8IW70 566 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 DNAJC22Q8N4W6 341 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 ZBTB2Q8N680 514 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 NAT8LQ8N9F0 302 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 MCUQ8NE86 351 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 DENND1AQ8TEH3 1009 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 SLC30A3Q99726 388 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 EPN3Q9H201 632 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 TCFL5Q9UL49 500 aa13.49□□□□□ -0.25
VTI1A-206ENST00000489142 PCM1Q15154 2024 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 E5RI56 91 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 KPNA5O15131 536 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 ZSCAN9O15535 394 aaPredicted RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 ESR1P03372 595 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 PDGFAP04085 211 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 MLNP12872 115 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 PKMP14618 531 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 MCM3P25205 808 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 FNTAP49354 379 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 YBX1P67809 324 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 MPP1Q00013 466 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 TLE1Q04724 770 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 THOC5Q13769 683 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 FASTKQ14296 549 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 NCF4Q15080 339 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 SF1Q15637 639 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 RNASEH2BQ5TBB1 312 aaKnown RBP13.48□□□□□ -0.25
VTI1A-206ENST00000489142 MLIPQ5VWP3 458 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 FCRL6Q6DN72 434 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 TTC23LQ6PF05 361 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 GIMAP7Q8NHV1 300 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 ADAMTS17Q8TE56 1095 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 GRK7Q8WTQ7 553 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 RAD51AP1Q96B01 352 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 SIGLEC10Q96LC7 697 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 FOPNLQ96NB1 174 aa13.48□□□□□ -0.25
VTI1A-206ENST00000489142 TCF12Q99081 682 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms