RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 CSTF1Q05048 431 aaKnown RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 EIF2B5Q13144 721 aaKnown RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 PRKG2Q13237 762 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 ARHGAP19Q14CB8 494 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 RPE65Q16518 533 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 SLC9B1Q4ZJI4 515 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 THEMIS2Q5TEJ8 643 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 LETMD1Q6P1Q0 360 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 WASH2PQ6VEQ5 465 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 THOC6Q86W42 341 aaKnown RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 LONP2Q86WA8 852 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.73□□□□□ -0.85
USP11-211ENST00000489111 KLHDC8AQ8IYD2 350 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 DCBLD1Q8N8Z6 715 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 OR4F6Q8NGB9 312 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 OR56A3Q8NH54 315 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 METTL6Q8TCB7 284 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 MAPK15Q8TD08 544 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 ZNF480Q8WV37 535 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 CXorf40BQ96DE9 158 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 CDK15Q96Q40 435 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 INSM2Q96T92 566 aaPredicted RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 CCDC28BQ9BUN5 200 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 SLC29A3Q9BZD2 475 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 DUSP15Q9H1R2 295 aaPredicted RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 WDR55Q9H6Y2 383 aaPredicted RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 MEAF6Q9HAF1 191 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 PRM3Q9NNZ6 103 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 WASH6PQ9NQA3 447 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 TBC1D29Q9UFV1 150 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 APOBEC3BQ9UH17 382 aaKnown RBP9.73□□□□□ -0.85
USP11-211ENST00000489111 TRPS1Q9UHF7 1281 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 PLAGL1Q9UM63 463 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 SLC22A14Q9Y267 594 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 BTRCQ9Y297 605 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 WDR37Q9Y2I8 494 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 DYRK1BQ9Y463 629 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 COLEC10Q9Y6Z7 277 aa9.73□□□□□ -0.85
USP11-211ENST00000489111 A0A1W2PR77 199 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 OR52A4PA6NMU1 304 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 E9PBE3 544 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 TLR4O00206 839 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 SDHDO14521 159 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 KLHL41O60662 606 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 VPS4BO75351 444 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 KRT6AP02538 564 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 KRT6BP04259 564 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 JUNP05412 331 aaKnown RBP9.72□□□□□ -0.85
USP11-211ENST00000489111 CAPN1P07384 714 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 SLC2A4P14672 509 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 JUNDP17535 347 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 NCF2P19878 526 aaPredicted RBP9.72□□□□□ -0.85
USP11-211ENST00000489111 MAOBP27338 520 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 PRDX3P30048 256 aaKnown RBP9.72□□□□□ -0.85
USP11-211ENST00000489111 KRT6CP48668 564 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 AFF3P51826 1226 aaKnown RBP9.72□□□□□ -0.85
USP11-211ENST00000489111 FOXA1P55317 472 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 ERVPABLB-1P60509 514 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 IRF8Q02556 426 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 TEAD4Q15561 434 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 ZNF542PQ5EBM4 170 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 XKR6Q5GH73 641 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 LYSMD4Q5XG99 296 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 C6orf89Q6UWU4 347 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 LAYNQ6UX15 382 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 TAF8Q7Z7C8 310 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 CLNKQ7Z7G1 428 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 C1orf210Q8IVY1 113 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 TRIM48Q8IWZ4 208 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 PPFIBP2Q8ND30 876 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 ACTRT2Q8TDY3 377 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 SMPDL3AQ92484 453 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 SH3KBP1Q96B97 665 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 CAMK1GQ96NX5 476 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 IL17FQ96PD4 163 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 OR52B2Q96RD2 323 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 CCT7Q99832 543 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 NTMT1Q9BV86 223 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 NMUR2Q9GZQ4 415 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 MYLK2Q9H1R3 596 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 RIC8BQ9NVN3 520 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 GPRC5BQ9NZH0 403 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 PNMA8BQ9ULN7 279 aaPredicted RBP9.72□□□□□ -0.85
USP11-211ENST00000489111 TIMM22Q9Y584 194 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 DNAJC15Q9Y5T4 150 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 KCNE2Q9Y6J6 123 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 SLCO1B1Q9Y6L6 691 aa9.72□□□□□ -0.85
USP11-211ENST00000489111 ATXN2Q99700 1313 aaKnown RBP9.72□□□□□ -0.85
USP11-211ENST00000489111 MYO10Q9HD67 2058 aa9.71□□□□□ -0.85
USP11-211ENST00000489111 A0A1B0GTL3 188 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 E7ENX8 843 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 FFAR3O14843 346 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 BCAT2O15382 392 aaPredicted RBP9.71□□□□□ -0.86
USP11-211ENST00000489111 GPR42O15529 346 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 UGDHO60701 494 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 UBOX5O94941 541 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 WNT1P04628 370 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 SERPINA6P08185 405 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 LINC00032P0C843 101 aa9.71□□□□□ -0.86
USP11-211ENST00000489111 TDGF1P13385 188 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms