RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 PSMD13Q9UNM6 376 aa18.87■□□□□ 0.61
CCM2-216ENST00000488727 LY6G6EA0A0G2JKS1 128 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 SLC5A10A0PJK1 596 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 F8W8V4 182 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 CBFA2T3O75081 653 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 ALPPL2P10696 532 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 MYF5P13349 255 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 F3P13726 295 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 CHRM3P20309 590 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 SAT1P21673 171 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PDHA2P29803 388 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PRDX6P30041 224 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 CPA2P48052 419 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 TAS2R39P59534 338 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 OGFOD3Q6PK18 319 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PIP4P1Q86T03 277 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 SLC35F3Q8IY50 421 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 KYQ8NBH2 561 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 GIMAP7Q8NHV1 300 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 BAHD1Q8TBE0 780 aaPredicted RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 KCNJ9Q92806 393 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 APOLD1Q96LR9 279 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 SLC30A3Q99726 388 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 ILKAPQ9H0C8 392 aaPredicted RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 MRPL46Q9H2W6 279 aaKnown RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 SARS2Q9NP81 518 aaKnown RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 XPR1Q9UBH6 696 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 CDYLQ9Y232 598 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 COMMD10Q9Y6G5 202 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 U3KQA8 63 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PDZK1P1A8MUH7 402 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 LIN7AO14910 233 aaPredicted RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 CLCN7P51798 805 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PGGT1BP53609 377 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 CDKN2DP55273 166 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 DLG1Q12959 904 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PRKAA1Q13131 559 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 PROX2Q3B8N5 592 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 INAVAQ3KP66 663 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 CFAP157Q5JU67 520 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 ABRAXAS1Q6UWZ7 409 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 WASH2PQ6VEQ5 465 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 GPATCH11Q8N954 259 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 GPR156Q8NFN8 814 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 SPDYE1Q8NFV5 336 aaPredicted RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 TSPAN17Q96FV3 270 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 MRPL57Q9BQC6 102 aaKnown RBP18.86■□□□□ 0.61
CCM2-216ENST00000488727 OR52A5Q9H2C5 316 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 WASH6PQ9NQA3 447 aa18.86■□□□□ 0.61
CCM2-216ENST00000488727 SPEGQ15772 3267 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 TRBV23OR9-2A0A075B6M9 112 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 E5RI56 91 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 SLCO1B7G3V0H7 640 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 MATN2O00339 956 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 TM4SF5O14894 197 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 NPHS1O60500 1241 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 ENTPD5O75356 428 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 GPC4O75487 556 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 SERPINB5P36952 375 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 SLC12A2P55011 1212 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 DNAJB13P59910 316 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 HSPA14Q0VDF9 509 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 CLCA4Q14CN2 919 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 AGAP9Q5VTM2 703 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 IYDQ6PHW0 289 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 PIM3Q86V86 326 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 C17orf82Q86X59 251 aaPredicted RBP18.85■□□□□ 0.61
CCM2-216ENST00000488727 VRK3Q8IV63 474 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 FAM181AQ8N9Y4 354 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 SIDT2Q8NBJ9 832 aaKnown RBP18.85■□□□□ 0.61
CCM2-216ENST00000488727 NXNL1Q96CM4 212 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 GPR21Q99679 349 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 LATS2Q9NRM7 1088 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 ACSL5Q9ULC5 683 aa18.85■□□□□ 0.61
CCM2-216ENST00000488727 CORO1CQ9ULV4 474 aaPredicted RBP18.85■□□□□ 0.61
CCM2-216ENST00000488727 OR52A4PA6NMU1 304 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 DLX3O60479 287 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 DIAPH2O60879 1101 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 CPOXP36551 454 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 MAZP56270 477 aaKnown RBP18.84■□□□□ 0.61
CCM2-216ENST00000488727 RPA4Q13156 261 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 SYTL3Q4VX76 610 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 HECTD2Q5U5R9 776 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 TLDC1Q6P9B6 456 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 SFRP1Q8N474 314 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 ARL10Q8N8L6 244 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 FBXO27Q8NI29 283 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 CD200R1Q8TD46 325 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 SLC37A2Q8TED4 501 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 ASZ1Q8WWH4 475 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 OLFM1Q99784 485 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 IGSF5Q9NSI5 407 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 VTI1BQ9UEU0 232 aa18.84■□□□□ 0.61
CCM2-216ENST00000488727 PCNX2A6NKB5 2137 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 SLC30A4O14863 429 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 HDAC3O15379 428 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 WISP3O95389 354 aaPredicted RBP18.83■□□□□ 0.61
CCM2-216ENST00000488727 FDXRP22570 491 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 MPSTP25325 297 aa18.83■□□□□ 0.61
CCM2-216ENST00000488727 GCKP35557 465 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms