RNA–Protein interactions for RNA: ENST00000488632.1

LBR-208, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-208ENST00000488632 KCNAB1Q14722 419 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CASP8Q14790 479 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PDGFRLQ15198 375 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 RPS6KA2Q15349 733 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ZNF77Q15935 545 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CSRP2Q16527 193 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PARP6Q2NL67 630 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 KRTAP15-1Q3LI76 137 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 LRIT3Q3SXY7 679 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 TBRG1Q3YBR2 411 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 C5orf22Q49AR2 442 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PREPLQ4J6C6 727 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 HSP90B2PQ58FF3 399 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 DNAJC21Q5F1R6 531 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 SPDYCQ5MJ68 293 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ANKRD20A2Q5SQ80 823 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 BEND6Q5SZJ8 279 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 MPP7Q5T2T1 576 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 STXBP5Q5T5C0 1151 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 RNASEH2BQ5TBB1 312 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 ANKRD20A1Q5TYW2 823 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ANKRD20A3Q5VUR7 823 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 METRNLQ641Q3 311 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 DENND2CQ68D51 928 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ABLIM2Q6H8Q1 611 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 NAPEPLDQ6IQ20 393 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ANKRD54Q6NXT1 300 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 MZT2BQ6NZ67 158 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 RFWD3Q6PCD5 774 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 TUBA3EQ6PEY2 450 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 RHBDF2Q6PJF5 856 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PCSK4Q6UW60 755 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CCNI2Q6ZMN8 369 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 MICALCLQ6ZW33 695 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CENPUQ71F23 418 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 TRMT10CQ7L0Y3 403 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 PID1Q7Z2X4 250 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 TMPRSS9Q7Z410 1059 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 GPR149Q86SP6 731 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CROCCP2Q86T23 111 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 LINC00523Q86TU6 105 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 SETD3Q86TU7 594 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 NLRP14Q86W24 1093 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 SYT12Q8IV01 421 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ARID3BQ8IVW6 561 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 C1orf210Q8IVY1 113 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 MFN1Q8IWA4 741 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ARHGAP12Q8IWW6 846 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 BBS7Q8IWZ6 715 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 SUGP1Q8IWZ8 645 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 FAM217AQ8IXS0 508 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 SLC15A3Q8IY34 581 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ZNF683Q8IZ20 524 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CMTM8Q8IZV2 173 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PDIK1LQ8N165 341 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ZNF567Q8N184 647 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CARNMT1Q8N4J0 409 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ZNF808Q8N4W9 903 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 C12orf76Q8N812 135 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 DCAF4L2Q8NA75 395 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PCYOX1LQ8NBM8 494 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 SIMC1Q8NDZ2 872 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 MCUQ8NE86 351 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 OR56A1Q8NGH5 318 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ITFG1Q8TB96 612 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CCDC110Q8TBZ0 833 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 FBXO25Q8TCJ0 367 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 WFIKKN2Q8TEU8 576 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ZNF483Q8TF39 744 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 DDI1Q8WTU0 396 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 UBLCP1Q8WVY7 318 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 NEU4Q8WWR8 484 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 ASB12Q8WXK4 309 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 SNX19Q92543 992 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PRCCQ92733 491 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 SMARCD2Q92925 531 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 ART4Q93070 314 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 IGSF8Q969P0 613 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 WBP2Q969T9 261 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 OTUB2Q96DC9 234 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PABPC5Q96DU9 382 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 TCEAL4Q96EI5 215 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 TMA16Q96EY4 203 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 CFAP36Q96G28 342 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 BOD1Q96IK1 185 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PKNOX2Q96KN3 472 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PRICKLE1Q96MT3 831 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 ZNF599Q96NL3 588 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 NECTIN4Q96NY8 510 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 AGAP3Q96P47 875 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 TSGA13Q96PP4 275 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 HIST1H2AAQ96QV6 131 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 CYP2S1Q96SQ9 504 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 LGMNQ99538 433 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 MNTQ99583 582 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 IL12RB2Q99665 862 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 PRMT1Q99873 361 aaKnown RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 CINPQ9BW66 212 aaPredicted RBP2.34□□□□□ -2.03
LBR-208ENST00000488632 BBS2Q9BXC9 721 aa2.34□□□□□ -2.03
LBR-208ENST00000488632 FSD1LQ9BXM9 530 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms