RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CENPLQ8N0S6 344 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 NKAPQ8N5F7 415 aaKnown RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 FBXO15Q8NCQ5 510 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 PPFIBP2Q8ND30 876 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 FLVCR1-AS1Q8TAF5 88 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 MAGEC3Q8TD91 643 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 KCTD4Q8WVF5 259 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 EXT2Q93063 718 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ZDHHC12Q96GR4 267 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 LIN37Q96GY3 246 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 MAP3K3Q99759 626 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 DPYSL5Q9BPU6 564 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 RAB11FIP5Q9BXF6 653 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 STRADBQ9C0K7 418 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 DERL2Q9GZP9 239 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 RAB33BQ9H082 229 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 SYTL2Q9HCH5 934 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 OR6C2Q9NZP2 312 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 PSMC3IPQ9P2W1 217 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 EPHA6Q9UF33 1036 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ZNF180Q9UJW8 692 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ANGPTL2Q9UKU9 493 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 WDFY3Q8IZQ1 3526 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 FER1L5A0AVI2 2057 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ACACAQ13085 2346 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 A0A096LPK6 155 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 IGHV5-51A0A0C4DH38 117 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 C2orf74A8MZ97 194 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ISM1B1AKI9 464 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 MATN2O00339 956 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 SLC16A5O15375 505 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 KRT37O76014 449 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 GUCA1CO95843 209 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ANKRD34CP0C6C1 535 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ERGP11308 486 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 CD1DP15813 335 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ITIH1P19827 911 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 CDH3P22223 829 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 IMPA1P29218 277 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 CRABP2P29373 138 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 MAGEA12P43365 314 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PNLIPRP1P54315 467 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 TBPL1P62380 186 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 GABREP78334 506 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 SHC2P98077 582 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 KCNAB1Q14722 419 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 OR4D1Q15615 310 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 CYP2A13Q16696 494 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 SPESP1Q6UW49 350 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 SUSD1Q6UWL2 747 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 RAB11FIP2Q7L804 512 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ARHGAP22Q7Z5H3 698 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ADAMTSL2Q86TH1 951 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 TBC1D1Q86TI0 1168 aaPredicted RBP10.68□□□□□ -0.7
UBE4B-210ENST00000488228 FAM129CQ86XR2 697 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 SYTL1Q8IYJ3 562 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 RAB42Q8N4Z0 105 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ZNF480Q8WV37 535 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PMEPA1Q969W9 287 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ISL2Q96A47 359 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PTERQ96BW5 349 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PDLIM5Q96HC4 596 aaKnown RBP10.68□□□□□ -0.7
UBE4B-210ENST00000488228 UBXN10Q96LJ8 280 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 SLC12A9Q9BXP2 914 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 VPS11Q9H270 941 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PARVBQ9HBI1 364 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 IGSF5Q9NSI5 407 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ABCF3Q9NUQ8 709 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PCMTD2Q9NV79 361 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ARL15Q9NXU5 204 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 STOX2Q9P2F5 926 aaPredicted RBP10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PDP2Q9P2J9 529 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 PISDQ9UG56 409 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 FETUBQ9UGM5 382 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 TBK1Q9UHD2 729 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 KLHL20Q9Y2M5 609 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 MSRB2Q9Y3D2 182 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 TPRP12270 2363 aaKnown RBP10.68□□□□□ -0.7
UBE4B-210ENST00000488228 ANKRD11Q6UB99 2663 aaPredicted RBP10.68□□□□□ -0.7
UBE4B-210ENST00000488228 AHCTF1Q8WYP5 2266 aa10.68□□□□□ -0.7
UBE4B-210ENST00000488228 A0A087X1B8 175 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 A0A1W2PPV9 198 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 PABPN1LA6NDY0 278 aaKnown RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 FOXO6A8MYZ6 492 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 PLD2O14939 933 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 HGSO14964 777 aaPredicted RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 PRAMEF10O60809 474 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 C2P06681 752 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 SNRPAP09012 282 aaKnown RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 CCL4P13236 92 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ST6GAL1P15907 406 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 CNTFP26441 200 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 TYK2P29597 1187 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 PRDX3P30048 256 aaKnown RBP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ETV5P41161 510 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 GLRBP48167 497 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 SH3BP2P78314 561 aa10.67□□□□□ -0.7
UBE4B-210ENST00000488228 TRA2AQ13595 282 aaKnown RBP eCLIP10.67□□□□□ -0.7
UBE4B-210ENST00000488228 ADGRD1Q6QNK2 874 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms