RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 GRK6P43250 576 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 ATP1A2P50993 1020 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 PNLIPRP1P54315 467 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 EPHA4P54764 986 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 PCLAFQ15004 111 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 PLCL1Q15111 1095 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 SHBQ15464 509 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 NR0B2Q15466 257 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 DEFB133Q30KQ1 61 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 PRAMEF14Q5SWL7 426 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 AGTRAPQ6RW13 159 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 TMEM26Q6ZUK4 368 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 AMIGO1Q86WK6 493 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 NAGSQ8N159 534 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 ARL14Q8N4G2 192 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 MINDY1Q8N5J2 469 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 GPR156Q8NFN8 814 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 OR2L8Q8NGY9 312 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 OR56A3Q8NH54 315 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 MDM1Q8TC05 714 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 SLC37A2Q8TED4 501 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 CKAP2Q8WWK9 683 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 EXT2Q93063 718 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 PHF21BQ96EK2 531 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 SLC38A3Q99624 504 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 HGH1Q9BTY7 390 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 SRMSQ9H3Y6 488 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 SLC32A1Q9H598 525 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 CCDC134Q9H6E4 229 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 MANSC1Q9H8J5 431 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 CCDC177Q9NQR7 707 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-242ENST00000488013 THAP1Q9NVV9 213 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 GPRC5BQ9NZH0 403 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 SCHIP1Q9P0W5 487 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-242ENST00000488013 STOX2Q9P2F5 926 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-242ENST00000488013 OPTCQ9UBM4 332 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 IKZF3Q9UKT9 509 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 ANGPTL3Q9Y5C1 460 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 CFAP20Q9Y6A4 193 aaKnown RBP10.72□□□□□ -0.69
HDLBP-242ENST00000488013 KCNE2Q9Y6J6 123 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 MYLKQ15746 1914 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 ABCA7Q8IZY2 2146 aa10.72□□□□□ -0.69
HDLBP-242ENST00000488013 NCF1BA6NI72 391 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 RHPN2P1A8MT19 583 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 NCF1CA8MVU1 366 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 PATE3B3GLJ2 98 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 E7ENX8 843 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 K7EPI3 171 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 FLRT2O43155 660 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 NOBOXO60393 691 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 SUPT7LO94864 414 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 OTCP00480 354 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 CELA2BP08218 269 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 NCF1P14598 390 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 IMPA1P29218 277 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 PKLRP30613 574 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 GMPRP36959 345 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 BDKRB1P46663 353 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 NAGLUP54802 743 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 ABATP80404 500 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 TAP2Q03519 686 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 LCP2Q13094 533 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 PRKAA1Q13131 559 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 PRKG2Q13237 762 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 STX3Q13277 289 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 KIR2DS3Q14952 304 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 CHI3L2Q15782 390 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 CLPPQ16740 277 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 GON4LQ3T8J9 2241 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 ZNF678Q5SXM1 525 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 C10orf62Q5T681 223 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 DBX2Q6ZNG2 339 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 KANSL1Q7Z3B3 1105 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 AFAP1L2Q8N4X5 818 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 OR52E1Q8NGJ3 308 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 ZNF480Q8WV37 535 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 PFDN4Q9NQP4 134 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 SEMA4GQ9NTN9 838 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 UCKL1Q9NWZ5 548 aa10.71□□□□□ -0.69
HDLBP-242ENST00000488013 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-242ENST00000488013 LNP1A1A4G5 178 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 SRRM3A6NNA2 597 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-242ENST00000488013 HGSO14964 777 aaPredicted RBP10.7□□□□□ -0.7
HDLBP-242ENST00000488013 UGDHO60701 494 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 EML2O95834 649 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 RPS17P08708 135 aaKnown RBP10.7□□□□□ -0.7
HDLBP-242ENST00000488013 GNAZP19086 355 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 EEF1DP29692 281 aaKnown RBP10.7□□□□□ -0.7
HDLBP-242ENST00000488013 SLC6A12P48065 614 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 HK2P52789 917 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 PKNOX1P55347 436 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 GPLD1P80108 840 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 PCDH1Q08174 1060 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 BNIP3Q12983 259 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 NAE1Q13564 534 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 RCN2Q14257 317 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 TCEA2Q15560 299 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 PTCHD3Q3KNS1 767 aa10.7□□□□□ -0.7
HDLBP-242ENST00000488013 ARMC6Q6NXE6 501 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms