RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PTCHD3Q3KNS1 767 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 ATG9BQ674R7 924 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 LPCAT2Q7L5N7 544 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 FAM9CQ8IZT9 166 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 FAM86B1Q8N7N1 296 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 OSBPL6Q9BZF3 934 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 KCNH6Q9H252 994 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 INVSQ9Y283 1065 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 MAN2B2Q9Y2E5 1009 aa17.53■□□□□ 0.4
PDLIM7-207ENST00000486828 NPIPB8E9PQR5 432 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 CXCR6O00574 342 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 KPNA5O15131 536 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 TRMUO75648 421 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 ALBP02768 609 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 ZNF30P17039 623 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 CYP2A7P20853 494 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 MTHFRP42898 656 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 PHC1P78364 1004 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 DAG1Q14118 895 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 GTDC1Q4AE62 458 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 OTUD3Q5T2D3 398 aaPredicted RBP17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 LRIF1Q5T3J3 769 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 NEK5Q6P3R8 708 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 ENPP6Q6UWR7 440 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 FKBP9P1Q75LS8 142 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 PLPP6Q8IY26 295 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 MICU2Q8IYU8 434 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 OR2A12Q8NGT7 310 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 FBXO30Q8TB52 745 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 CMTM7Q96FZ5 175 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 BBS2Q9BXC9 721 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 YTHDF1Q9BYJ9 559 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 KAT8Q9H7Z6 458 aaKnown RBP17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 HCFC1R1Q9NWW0 138 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 LIMD1Q9UGP4 676 aa17.52■□□□□ 0.4
PDLIM7-207ENST00000486828 A0A096LPI6 279 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 TTC36A6NLP5 189 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 FAM220BPB1ANY3 271 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 H0Y858 1186 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 PCNAP12004 261 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 PCSK2P16519 638 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 MAPK1P28482 360 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 S100A3P33764 101 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 NRIP1P48552 1158 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 NEK2P51955 445 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 AP1S2P56377 157 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 ESRRGP62508 458 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 NKG7Q16617 165 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SLC44A4Q53GD3 710 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 AP1ARQ63HQ0 302 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 BRAT1Q6PJG6 821 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SERPINA13PQ6UXR4 307 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 NEK10Q6ZWH5 1172 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 GPR141Q7Z602 305 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 FAM162AQ96A26 154 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SLC47A1Q96FL8 570 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 P2RY13Q9BPV8 354 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 CPPED1Q9BRF8 314 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 TBCDQ9BTW9 1192 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SOX17Q9H6I2 414 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 RMND5AQ9H871 391 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SERHLQ9NQF3 203 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SLC6A13Q9NSD5 602 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 DNAJC11Q9NVH1 559 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 DDX18Q9NVP1 670 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 TMED5Q9Y3A6 229 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 PCDHB14Q9Y5E9 798 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SERTM1A2A2V5 107 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 HPRP00739 348 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 ALPLP05186 524 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 CYP2A6P11509 494 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 VIPR1P32241 457 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 DMC1Q14565 340 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 ZBED5Q49AG3 693 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 GPR149Q86SP6 731 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 ADIPOR2Q86V24 386 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 CALHM3Q86XJ0 350 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 BEND7Q8N7W2 519 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 ZNF557Q8N988 423 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 MCOLN3Q8TDD5 553 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 TESCQ96BS2 214 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 PYCR2Q96C36 320 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 ITCHQ96J02 903 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 MAGEB10Q96LZ2 347 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 DNAJB9Q9UBS3 223 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 SLC22A14Q9Y267 594 aa17.51■□□□□ 0.39
PDLIM7-207ENST00000486828 LAMA2P24043 3122 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 C16orf96A6NNT2 1141 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 CFAP99D6REC4 459 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 RETP07949 1114 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 LINC00271P0C7V0 271 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 ACPPP15309 386 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 TCF3P15923 654 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 HOXB9P17482 250 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 SDC1P18827 310 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 RECQLP46063 649 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 DCDC1P59894 354 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 ELMSAN1Q6PJG2 1045 aa17.5■□□□□ 0.39
PDLIM7-207ENST00000486828 GCNT7Q6ZNI0 430 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms