RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 NYNRINQ9P2P1 1898 aaKnown RBP10.41□□□□□ -0.74
CCDC171-208ENST00000486641 NPEPPSL1A6NEC2 478 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 OR6C70A6NIJ9 312 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 LDB2O43679 373 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 KIAA0513O60268 411 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 MYCP01106 439 aaPredicted RBP10.4□□□□□ -0.74
CCDC171-208ENST00000486641 PRSS56P0CW18 603 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 MAGEA2P43356 314 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 RGS6P49758 472 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 ITKQ08881 620 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 TP53BP2Q13625 1128 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 PTGR1Q14914 329 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 NR6A1Q15406 480 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 DDR2Q16832 855 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 FAM174BQ3ZCQ3 159 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 ARMCX4Q5H9R4 360 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 LETMD1Q6P1Q0 360 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 GGHQ92820 318 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 AARSD1Q9BTE6 412 aaKnown RBP10.4□□□□□ -0.74
CCDC171-208ENST00000486641 C1QTNF3Q9BXJ4 246 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 DERL2Q9GZP9 239 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 SLC25A51Q9H1U9 297 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 POPDC3Q9HBV1 291 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 KRT84Q9NSB2 600 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 EIF2B4Q9UI10 523 aaKnown RBP10.4□□□□□ -0.74
CCDC171-208ENST00000486641 AGRPO00253 132 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 E2F3O00716 465 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 STX16O14662 325 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 PER2O15055 1255 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 MUSKO15146 869 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 SHOXO15266 292 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 IL1RNP18510 177 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 POLR2CP19387 275 aaPredicted RBP10.4□□□□□ -0.74
CCDC171-208ENST00000486641 AKAP5P24588 427 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 CCR1P32246 355 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 TIE1P35590 1138 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 RPS5P46782 204 aaKnown RBP10.4□□□□□ -0.74
CCDC171-208ENST00000486641 GZMMP51124 257 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 NPRL3Q12980 569 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 EFR3AQ14156 821 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 FAM171A1Q5VUB5 890 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 SYCE2Q6PIF2 218 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 Q6ZPB1 254 aaPredicted RBP10.4□□□□□ -0.74
CCDC171-208ENST00000486641 TAC4Q86UU9 113 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 SLC51BQ86UW2 128 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 P3H2Q8IVL5 708 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 CACTIN-AS1Q8N1I8 211 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 ESX1Q8N693 406 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 LINC01465Q8N7H1 131 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 PAF1Q8N7H5 531 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 FLAD1Q8NFF5 587 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 FLCNQ8NFG4 579 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 METTL6Q8TCB7 284 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 PPP1R13LQ8WUF5 828 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 TBC1D20Q96BZ9 403 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 SMOQ99835 787 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 AS3MTQ9HBK9 375 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 TMEM30AQ9NV96 361 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 SIRT5Q9NXA8 310 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 MAT2BQ9NZL9 334 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 PCDHGA6Q9Y5G7 932 aa10.4□□□□□ -0.74
CCDC171-208ENST00000486641 BTN3A1O00481 513 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 RHOBTB1O94844 696 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 ZNF682O95780 498 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 PTHP01270 115 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 CDK1P06493 297 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 CAPN1P07384 714 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 HSMCR30P0CW71 290 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 IFI30P13284 250 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 HOXA11P31270 313 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-208ENST00000486641 DNAJA1P31689 397 aaKnown RBP10.39□□□□□ -0.75
CCDC171-208ENST00000486641 AKT1P31749 480 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 HK3P52790 923 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 CSNK2BP67870 215 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 CYP4F2P78329 520 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 FAPQ12884 760 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 TAB1Q15750 504 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 SIRPB2Q5JXA9 342 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 SPANXN4Q5MJ08 99 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 NBPF12Q5TAG4 269 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-208ENST00000486641 KIAA1841Q6NSI8 718 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 ALKAL1Q6UXT8 129 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 BHLHA9Q7RTU4 235 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 LIMS2Q7Z4I7 341 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 CALHM3Q86XJ0 350 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 RIOX2Q8IUF8 465 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 ATG16L2Q8NAA4 619 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 ST13P5Q8NFI4 369 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-208ENST00000486641 OR4M1Q8NGD0 313 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 ZFAND1Q8TCF1 268 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 DEDD2Q8WXF8 326 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 MYDGFQ969H8 173 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 IMP4Q96G21 291 aaKnown RBP10.39□□□□□ -0.75
CCDC171-208ENST00000486641 NECTIN4Q96NY8 510 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 R3HDMLQ9H3Y0 253 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 SYTL2Q9HCH5 934 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 NT5MQ9NPB1 228 aa10.39□□□□□ -0.75
CCDC171-208ENST00000486641 ZNF277Q9NRM2 450 aaPredicted RBP10.39□□□□□ -0.75
CCDC171-208ENST00000486641 C1orf109Q9NX04 203 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms