RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 IL17FQ96PD4 163 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 ADNPQ9H2P0 1102 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 PCYOX1Q9UHG3 505 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 PYCARDQ9ULZ3 195 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 POLHQ9Y253 713 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 PCDHGA6Q9Y5G7 932 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 FER1L5A0AVI2 2057 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 BAHCC1Q9P281 2608 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 CFAP46Q8IYW2 2715 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 ZCWPW2A0A1B0GU75 182 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 CREG1O75629 220 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 C1orf105O95561 183 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 TPBGLP0DKB5 382 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 MAGP20916 626 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 F8A1P23610 371 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 PEBP1P30086 187 aaKnown RBP12.43□□□□□ -0.42
CHMP3-208ENST00000486404 CTBP1Q13363 440 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 CRYMQ14894 314 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 BBS9Q3SYG4 887 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 PRAMEF17Q5VTA0 474 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 PAPD7Q5XG87 772 aaKnown RBP12.43□□□□□ -0.42
CHMP3-208ENST00000486404 FAM199XQ6PEV8 388 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-208ENST00000486404 TMEM135Q86UB9 458 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 SYTL1Q8IYJ3 562 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 DSELQ8IZU8 1212 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 C2orf73Q8N5S3 287 aaPredicted RBP12.43□□□□□ -0.42
CHMP3-208ENST00000486404 APOBEC4Q8WW27 367 aaKnown RBP12.43□□□□□ -0.42
CHMP3-208ENST00000486404 LRFN5Q96NI6 719 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 NAT9Q9BTE0 207 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 GPR87Q9BY21 358 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 CHST8Q9H2A9 424 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 FAM114A2Q9NRY5 505 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 SPATA7Q9P0W8 599 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 SRPK3Q9UPE1 567 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 MAN2B2Q9Y2E5 1009 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 NFS1Q9Y697 457 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 SPTA1P02549 2419 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 ZNF462Q96JM2 2506 aa12.43□□□□□ -0.42
CHMP3-208ENST00000486404 PCM1Q15154 2024 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 TLN1Q9Y490 2541 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 GCN1Q92616 2671 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 CCDC188H7C350 402 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 MEN1O00255 615 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 TERTO14746 1132 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 ZSCAN9O15535 394 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 ZNF749O43361 778 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 VPS26AO75436 327 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 TTC4O95801 387 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 CATP04040 527 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 F7P08709 466 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 AGXTP21549 392 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 PTPN4P29074 926 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 RPS18P62269 152 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 MPP1Q00013 466 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 DHX9Q08211 1270 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 TSTA3Q13630 321 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 MORF4L2Q15014 288 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 SF1Q15637 639 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 PTCHD3Q3KNS1 767 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 HSP90AA5PQ58FG0 334 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 SPANXN3Q5MJ09 141 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 SYVN1Q86TM6 617 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 ENDOVQ8N8Q3 282 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 LINC01555Q8NAE3 123 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 FLVCR1-AS1Q8TAF5 88 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 C9orf43Q8TAL5 461 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 KCNJ9Q92806 393 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 CFAP36Q96G28 342 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 SIGLEC10Q96LC7 697 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 C17orf62Q9BQA9 187 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 DPH2Q9BQC3 489 aaPredicted RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 CHRNA10Q9GZZ6 450 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 PPANQ9NQ55 473 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 IARS2Q9NSE4 1012 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 TXLNGQ9NUQ3 528 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 GEMIN8Q9NWZ8 242 aaKnown RBP12.42□□□□□ -0.42
CHMP3-208ENST00000486404 FBXO5Q9UKT4 447 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 PADI2Q9Y2J8 665 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 COMMD10Q9Y6G5 202 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 AP1M2Q9Y6Q5 423 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 FAM169AQ9Y6X4 670 aa12.42□□□□□ -0.42
CHMP3-208ENST00000486404 B8ZZF3 427 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 SMAPO00193 183 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 SLC28A2O43868 658 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 RFPL1O75677 317 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 FKBP9O95302 570 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 RORAP35398 523 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 PTGIRP43119 386 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 CUL1Q13616 776 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 GRB7Q14451 532 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 NAA25Q14CX7 972 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 ZIC1Q15915 447 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 KLHL38Q2WGJ6 581 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 ACSBG2Q5FVE4 666 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 ZNF789Q5FWF6 425 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 NUP210LQ5VU65 1888 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 FAM198BQ6UWH4 519 aa12.41□□□□□ -0.42
CHMP3-208ENST00000486404 CREG2Q8IUH2 290 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms