RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.64□□□□□ -0.55
PKP4-213ENST00000486254 FAM219BQ5XKK7 198 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 RAET1GQ6H3X3 334 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 GRHL2Q6ISB3 625 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 OXR1Q8N573 874 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 SNX31Q8N9S9 440 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 OR2L2Q8NH16 312 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 CXorf40AQ8TE69 158 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 TESCQ96BS2 214 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 WDR34Q96EX3 536 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 RIPOR3Q96MK2 946 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 MYADMQ96S97 322 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 GDF15Q99988 308 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 ACPTQ9BZG2 426 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 S1PR5Q9H228 398 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 EHD1Q9H4M9 534 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 CERS4Q9HA82 394 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 CMTM6Q9NX76 183 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 LMCD1Q9NZU5 365 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 STOX2Q9P2F5 926 aaPredicted RBP11.64□□□□□ -0.55
PKP4-213ENST00000486254 GULP1Q9UBP9 304 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 HCN2Q9UL51 889 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 TSC22D4Q9Y3Q8 395 aa11.64□□□□□ -0.55
PKP4-213ENST00000486254 POLR3HQ9Y535 204 aaPredicted RBP11.64□□□□□ -0.55
PKP4-213ENST00000486254 MGAT4DA6NG13 374 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 TMEM202A6NGA9 273 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 RNASEH1O60930 286 aaKnown RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 GPIP06744 558 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 EPHX1P07099 455 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 SLC2A4P14672 509 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 HOXB6P17509 224 aaKnown RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 DRD3P35462 400 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 METAP1P53582 386 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 CLDN8P56748 225 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 KLC1Q07866 573 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 PWP1Q13610 501 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 BLMHQ13867 455 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 POM121L1PQ3SYA9 428 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 USP39Q53GS9 565 aaKnown RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 MTX3Q5HYI7 312 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 EGFLAMQ63HQ2 1017 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 AGTRAPQ6RW13 159 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 SCIMPQ6UWF3 145 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 DLEU7Q6UYE1 221 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 SPATA24Q86W54 205 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 MMAAQ8IVH4 418 aaKnown RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 APLFQ8IW19 511 aaPredicted RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 KIAA2013Q8IYS2 634 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 RNF148Q8N7C7 305 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 BEND7Q8N7W2 519 aaPredicted RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 SLC13A3Q8WWT9 602 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 SELENOMQ8WWX9 145 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 STARD8Q92502 1023 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 HIC2Q96JB3 615 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 LRGUKQ96M69 825 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 CCDC115Q96NT0 180 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 TRMT61BQ9BVS5 477 aaKnown RBP11.63□□□□□ -0.55
PKP4-213ENST00000486254 ALG2Q9H553 416 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 C8orf4Q9NR00 106 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 PPT2Q9UMR5 302 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 SLC22A14Q9Y267 594 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 MAN2B2Q9Y2E5 1009 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 SNX13Q9Y5W8 968 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 STON1Q9Y6Q2 735 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 CEP290O15078 2479 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 TRPM6Q9BX84 2022 aa11.63□□□□□ -0.55
PKP4-213ENST00000486254 FFAR3O14843 346 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 GPR42O15529 346 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 SEC22BO75396 215 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 C1orf105O95561 183 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PDYNP01213 254 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 UMPSP11172 480 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PIM1P11309 404 aaPredicted RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 PEX2P28328 305 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 IMPA1P29218 277 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 NME5P56597 212 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 CNTN1Q12860 1018 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 CHIT1Q13231 466 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 INPP5AQ14642 412 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 TRIP10Q15642 601 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 CST6Q15828 149 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PAGE3Q5JUK9 113 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 AGBL4Q5VU57 503 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 LAYNQ6UX15 382 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 THOC6Q86W42 341 aaKnown RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 TMEM102Q8N9M5 508 aaPredicted RBP11.62□□□□□ -0.55
PKP4-213ENST00000486254 HIPK4Q8NE63 616 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 WDR20Q8TBZ3 569 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 VPS33AQ96AX1 596 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 REPS1Q96D71 796 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 SLC45A3Q96JT2 553 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 CGREF1Q99674 301 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 SH3GL1Q99961 368 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 SGPP1Q9BX95 441 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 OSBPL6Q9BZF3 934 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 PLA2G2FQ9BZM2 168 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 DPY30Q9C005 99 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 VCXQ9H320 206 aa11.62□□□□□ -0.55
PKP4-213ENST00000486254 TRPV5Q9NQA5 729 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms