RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ARHGAP12Q8IWW6 846 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 EMC1Q8N766 993 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 STPG4Q8N801 248 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 SLC38A9Q8NBW4 561 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 GPRC5AQ8NFJ5 357 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 RDM1Q8NG50 284 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 KCNG4Q8TDN1 519 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 OXNAD1Q96HP4 312 aaPredicted RBP4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 PPM1MQ96MI6 270 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 SEMA3CQ99985 751 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 RAB6CQ9H0N0 254 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 TBX21Q9UL17 535 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 ZNFX1Q9P2E3 1918 aaKnown RBP4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 TET1Q8NFU7 2136 aa4.28□□□□□ -1.72
SMARCC1-207ENST00000485833 MCM3APO60318 1980 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 A0A0G2JNG1 304 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 KBTBD13C9JR72 458 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 WISP2O76076 250 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 LDLRP01130 860 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 KRT9P35527 623 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 NR2C2P49116 596 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 HSD17B4P51659 736 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 RPS3AP61247 264 aaKnown RBP4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 IRX3P78415 501 aaPredicted RBP4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 PMP22Q01453 160 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 LRMPQ12912 555 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 KIR2DS5Q14953 304 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 FCN2Q15485 313 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 NAB2Q15742 525 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 ALFQ53S48 1182 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 TECRLQ5HYJ1 363 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 WDR78Q5VTH9 848 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 PLXDC2Q6UX71 529 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 TSPAN33Q86UF1 283 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 LONP2Q86WA8 852 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 RASGEF1CQ8N431 466 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 SLC5A8Q8N695 610 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 DNAJC18Q9H819 358 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 EPB41L5Q9HCM4 733 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 TRPC7Q9HCX4 862 aa4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 R3HDM2Q9Y2K5 976 aaKnown RBP4.27□□□□□ -1.73
SMARCC1-207ENST00000485833 COL11A1P12107 1806 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 PARP14Q460N5 1801 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 H3BQ06 376 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 TIMP1P01033 207 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 EIF2S1P05198 315 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 CA3P07451 260 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 PSMA4P25789 261 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 ALDH4A1P30038 563 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 MAPK4P31152 587 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 PIK3CAP42336 1068 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 CTSCP53634 463 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 MBTD1Q05BQ5 628 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 G3BP1Q13283 466 aaKnown RBP eCLIP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 GRB14Q14449 540 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 LCE1FQ5T754 118 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 MFSD14CQ5VZR4 134 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 NCEH1Q6PIU2 408 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 PACS1Q6VY07 963 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 GLDNQ6ZMI3 551 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 ASCL5Q7RTU5 278 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 TMCO2Q7Z6W1 182 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 CPLX4Q7Z7G2 160 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 TRPT1Q86TN4 253 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 CCDC190Q86UF4 302 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 APLFQ8IW19 511 aaPredicted RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 HACE1Q8IYU2 909 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 GBGT1Q8N5D6 347 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 GCSAMQ8N6F7 178 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 OR8K5Q8NH50 307 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 ARHGEF2Q92974 986 aaKnown RBP4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 FSD1Q9BTV5 496 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 IDI2Q9BXS1 227 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 SLC26A6Q9BXS9 759 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 EHD2Q9NZN4 543 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 JRKLQ9Y4A0 524 aa4.26□□□□□ -1.73
SMARCC1-207ENST00000485833 GAKO14976 1311 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 CIDEAO60543 219 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 FRAT2O75474 233 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 CAVIN2O95810 425 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 RNF224P0DH78 156 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 CDH2P19022 906 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 VCPP55072 806 aaKnown RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 ZC2HC1CQ53FD0 456 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 RBMS3Q6XE24 437 aaKnown RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 ANO5Q75V66 913 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 ANKRD33Q7Z3H0 272 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 C1orf52Q8N6N3 182 aaKnown RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 PAF1Q8N7H5 531 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 CTCFLQ8NI51 663 aaPredicted RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 TRPC4APQ8TEL6 797 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 FCAMRQ8WWV6 532 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 ARNTL2Q8WYA1 636 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 C1orf74Q96LT6 269 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 C7orf26Q96N11 449 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 SLC52A3Q9NQ40 469 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 ACAD8Q9UKU7 415 aa4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 MYO5AQ9Y4I1 1855 aaKnown RBP4.25□□□□□ -1.73
SMARCC1-207ENST00000485833 FOCADQ5VW36 1801 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms