RNA–Protein interactions for RNA: ENST00000485042.1

XPA-203, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 706 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-203ENST00000485042 FAM43BQ6ZT52 329 aaPredicted RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 TLK2Q86UE8 772 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 FJX1Q86VR8 437 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 DZIP1Q86YF9 867 aaKnown RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 ZNF34Q8IZ26 560 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 SYCP3Q8IZU3 236 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 SPC24Q8NBT2 197 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 ATAD1Q8NBU5 361 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 NEXN-AS1Q8NBZ9 246 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 FIBINQ8TAL6 211 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 BBS10Q8TAM1 723 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 DENND1AQ8TEH3 1009 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 SLC38A5Q8WUX1 472 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 SEMA4DQ92854 862 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 PTP4A1Q93096 173 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 EXOC4Q96A65 974 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 STAMBPL1Q96FJ0 436 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 OTUB1Q96FW1 271 aaPredicted RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 C3orf30Q96M34 536 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 ZNF582Q96NG8 517 aaPredicted RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 CAMK1GQ96NX5 476 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 LRRC3BQ96PB8 259 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 MLPHQ9BV36 600 aaPredicted RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 GTPBP2Q9BX10 602 aaKnown RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 DCLK3Q9C098 648 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 SPRTNQ9H040 489 aaPredicted RBP4.23□□□□□ -1.73
XPA-203ENST00000485042 EBF3Q9H4W6 596 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 RETREG1Q9H6L5 497 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 PCDH9Q9HC56 1237 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 HIF1ANQ9NWT6 349 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 TBC1D7Q9P0N9 293 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 POLLQ9UGP5 575 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 RNF150Q9ULK6 438 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 PADI2Q9Y2J8 665 aa4.23□□□□□ -1.73
XPA-203ENST00000485042 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.23□□□□□ -1.738e-8■■■□□ 18.3
XPA-203ENST00000485042 ZNF804BA4D1E1 1349 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ARFGEF2Q9Y6D5 1785 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 KDM6AO15550 1401 aaPredicted RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 NCAPD2Q15021 1401 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 TRPM7Q96QT4 1865 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 A0A087WV48 116 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 A0A1W2PP11 408 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 BICDL2A1A5D9 508 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 LINC01553A4QN01 128 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GLTPD2A6NH11 291 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 IFIT3O14879 490 aaKnown RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 RFPL2O75678 378 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GAGE7O76087 117 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 BMP10O95393 424 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GAGE12FP0CL80 117 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GAGE12GP0CL81 117 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GAGE12IP0CL82 117 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 PSG1P11464 419 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 HOXB2P14652 356 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ADRA2CP18825 462 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 CORO1AP31146 461 aaKnown RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 TNNT2P45379 298 aaPredicted RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 ASCL1P50553 236 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 NAGLUP54802 743 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 TPD52P55327 224 aaPredicted RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 ABATP80404 500 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 TROAPQ12815 778 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 COASYQ13057 564 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GAGE1Q13065 139 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GAGE4Q13068 117 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 TYSND1Q2T9J0 566 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ANKRD20A4Q4UJ75 823 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ANKRD20A8PQ5CZ79 823 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 XKR9Q5GH70 373 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 EFHC1Q5JVL4 640 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ANKRD20A2Q5SQ80 823 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ANKRD20A1Q5TYW2 823 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 FAM69BQ5VUD6 431 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ANKRD20A3Q5VUR7 823 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 SHEQ5VZ18 495 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 TMPRSS11FQ6ZWK6 438 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GLCCI1Q86VQ1 547 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 TIGD4Q8IY51 512 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 NHLRC2Q8NBF2 726 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 GRAPLQ8TC17 118 aaPredicted RBP4.22□□□□□ -1.73
XPA-203ENST00000485042 PIGTQ969N2 578 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 OR1F2PQ96R84 312 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 INPP5KQ9BT40 448 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 LRMDAQ9H2I8 198 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 FN3KQ9H479 309 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 SLA2Q9H6Q3 261 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 ABCB8Q9NUT2 735 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 OSER1Q9NX31 292 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 NPAP1Q9NZP6 1156 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 C1RLQ9NZP8 487 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 SEPT10Q9P0V9 454 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 YIPF1Q9Y548 306 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 SCN4AP35499 1836 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 CARMIL3Q8ND23 1372 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 PDE4DIPQ5VU43 2346 aa4.22□□□□□ -1.73
XPA-203ENST00000485042 USP42Q9H9J4 1324 aaKnown RBP4.21□□□□□ -1.73
XPA-203ENST00000485042 LY6G6EA0A0G2JKS1 128 aa4.21□□□□□ -1.74
XPA-203ENST00000485042 FAM86B1E9PN63 330 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms