RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 C6orf15Q6UXA7 325 aaPredicted RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 BPHLQ86WA6 291 aaPredicted RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 TMEM126BQ8IUX1 230 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 SPNS2Q8IVW8 549 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 CPNE9Q8IYJ1 553 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 ESX1Q8N693 406 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 C19orf47Q8N9M1 422 aaKnown RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 LINC01555Q8NAE3 123 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 ZSCAN1Q8NBB4 408 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 GALNT6Q8NCL4 622 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 CD200R1Q8TD46 325 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 KIAA1143Q96AT1 154 aaPredicted RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 SLC22A18Q96BI1 424 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 LRRC1Q9BTT6 524 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 RALYQ9UKM9 306 aaKnown RBP18.49■□□□□ 0.55
SNX17-206ENST00000484886 MED16Q9Y2X0 877 aa18.49■□□□□ 0.55
SNX17-206ENST00000484886 ESYT3A0FGR9 886 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 ARHGEF33A8MVX0 844 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 DLGAP3O95886 979 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 SYF2O95926 243 aaKnown RBP18.48■□□□□ 0.55
SNX17-206ENST00000484886 MPC1LP0DKB6 136 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 CBSLP0DN79 551 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 PEBP1P30086 187 aaKnown RBP18.48■□□□□ 0.55
SNX17-206ENST00000484886 CBSP35520 551 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 RGS4P49798 205 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 TSTA3Q13630 321 aaPredicted RBP18.48■□□□□ 0.55
SNX17-206ENST00000484886 FRG1Q14331 258 aaKnown RBP18.48■□□□□ 0.55
SNX17-206ENST00000484886 TRADDQ15628 312 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 SLC5A12Q1EHB4 618 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 NEK10Q6ZWH5 1172 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 TIPARPQ7Z3E1 657 aaKnown RBP18.48■□□□□ 0.55
SNX17-206ENST00000484886 GALNT7Q86SF2 657 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 FAM20CQ8IXL6 584 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 OR8K5Q8NH50 307 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 FBXO25Q8TCJ0 367 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 LAMA5O15230 3695 aa18.48■□□□□ 0.55
SNX17-206ENST00000484886 CTAGE15A4D2H0 777 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 PSIP1O75475 530 aaKnown RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 SCRG1O75711 98 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 TIAF1O95411 115 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 CTAGE8P0CG41 777 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 SKIV2L2P42285 1042 aaKnown RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 CDKN2DP55273 166 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 GUCY2DQ02846 1103 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 PDAP1Q13442 181 aaKnown RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 SF1Q15637 639 aaKnown RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 PIWIL4Q7Z3Z4 852 aaKnown RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 STRA8Q7Z7C7 330 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 CTAGE6Q86UF2 777 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 CTAGE4Q8IX94 777 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 OR9A1PQ8NGU1 263 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 ZNF501Q96CX3 271 aaPredicted RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 TCTN2Q96GX1 697 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 MENTQ9BUN1 341 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 SPRY4Q9C004 299 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 GPN2Q9H9Y4 310 aaPredicted RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 IRAK4Q9NWZ3 460 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 SPATA7Q9P0W8 599 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 CORO1CQ9ULV4 474 aaPredicted RBP18.47■□□□□ 0.55
SNX17-206ENST00000484886 SSUH2Q9Y2M2 353 aa18.47■□□□□ 0.55
SNX17-206ENST00000484886 K7ENP7 123 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 EFSO43281 561 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 NTRK1P04629 796 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 CCNYL3P0C7X3 344 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 LIFP15018 202 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 CYP2A7P20853 494 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 SAT1P21673 171 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 SSTR1P30872 391 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 MAP7Q14244 749 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 DEFB110Q30KQ9 67 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.46■□□□□ 0.55
SNX17-206ENST00000484886 HECTD2Q5U5R9 776 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 LRRC8EQ6NSJ5 796 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 INO80CQ6PI98 192 aaPredicted RBP18.46■□□□□ 0.55
SNX17-206ENST00000484886 CDHR3Q6ZTQ4 885 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 MYO1HQ8N1T3 1032 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 FLVCR1-AS1Q8TAF5 88 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 EEF1AKMT1Q8WVE0 214 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 CDKL2Q92772 493 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 FCRL4Q96PJ5 515 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 SLC7A5P2Q9GIP4 190 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 SYTL2Q9HCH5 934 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 INTS7Q9NVH2 962 aaKnown RBP18.46■□□□□ 0.55
SNX17-206ENST00000484886 NSMCE4AQ9NXX6 385 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 MOCS1Q9NZB8 636 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 TXNDC16Q9P2K2 825 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 SERTAD3Q9UJW9 196 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 KLHL20Q9Y2M5 609 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 PSAT1Q9Y617 370 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 ITPR1Q14643 2758 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 ZFHX4Q86UP3 3567 aa18.46■□□□□ 0.55
SNX17-206ENST00000484886 EIF3FO00303 357 aaPredicted RBP18.45■□□□□ 0.54
SNX17-206ENST00000484886 ZBTB14O43829 449 aa18.45■□□□□ 0.54
SNX17-206ENST00000484886 CPNE3O75131 537 aaKnown RBP18.45■□□□□ 0.54
SNX17-206ENST00000484886 MT-ND3P03897 115 aa18.45■□□□□ 0.54
SNX17-206ENST00000484886 MAGP20916 626 aa18.45■□□□□ 0.54
SNX17-206ENST00000484886 PSMB5P28074 263 aa18.45■□□□□ 0.54
SNX17-206ENST00000484886 OAS2P29728 719 aaKnown RBP18.45■□□□□ 0.54
SNX17-206ENST00000484886 ABHD18Q0P651 414 aa18.45■□□□□ 0.54
SNX17-206ENST00000484886 FAM45BPQ6NSW5 357 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms