RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 NSG1P42857 185 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 CDKN1CP49918 316 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 IDH3AP50213 366 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 HERVK_113P63132 956 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 NFKB2Q00653 900 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 ST3GAL2Q16842 350 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SPRED3Q2MJR0 410 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 HES3Q5TGS1 186 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 BRICD5Q6PL45 260 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 NAPRTQ6XQN6 538 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 FRA10AC1Q70Z53 315 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 GLRX5Q86SX6 157 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SLC35F3Q8IY50 421 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PIANPQ8IYJ0 282 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 MYO1HQ8N1T3 1032 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 FBXO39Q8N4B4 442 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 OXR1Q8N573 874 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 KYQ8NBH2 561 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 OR4C6Q8NH72 309 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 FAM174AQ8TBP5 190 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 AGR3Q8TD06 166 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PATE1Q8WXA2 126 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 GATA6Q92908 595 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 EXT2Q93063 718 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PHF21BQ96EK2 531 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 L3HYPDHQ96EM0 354 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 WDR92Q96MX6 357 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PLEKHG4BQ96PX9 1271 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM237Q96Q45 408 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SPSB2Q99619 263 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 CCDC28BQ9BUN5 200 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 ERVK-6Q9BXR3 956 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SLC6A16Q9GZN6 736 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 NMUR2Q9GZQ4 415 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM168Q9H0V1 697 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 LRMDAQ9H2I8 198 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 WDR26Q9H7D7 661 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SYNDIG1Q9H7V2 258 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 COG4Q9H9E3 785 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 CYP4F12Q9HCS2 524 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SLC40A1Q9NP59 571 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SARS2Q9NP81 518 aaKnown RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PFDN4Q9NQP4 134 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 MAP10Q9P2G4 905 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 TAGLN3Q9UI15 199 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 CDYLQ9Y232 598 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 GPSM3Q9Y4H4 160 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 ITPR1Q14643 2758 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 TRBV5-4A0A0C4DH59 114 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CPED1A4D0V7 1026 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 RGSL1A5PLK6 1076 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 PABPN1LA6NDY0 278 aaKnown RBP6.77□□□□□ -1.33
BRCA1-216ENST00000484087 B4DGG1 531 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 H3BM21 787 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 MATN2O00339 956 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 BTN3A1O00481 513 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 YY2O15391 372 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 GYG2O15488 501 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 OR1I1O60431 355 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 DFNA5O60443 496 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 NIPSNAP2O75323 286 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 MTX2O75431 263 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CRCPO75575 148 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 DKK1O94907 266 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CBX6O95503 412 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CHRNGP07510 517 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 OR56A5P0C7T3 313 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 BPIP17213 487 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 MPSTP25325 297 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 GNPDA1P46926 289 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 SPINT3P49223 89 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 HK3P52790 923 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 SRP54P61011 504 aaKnown RBP6.77□□□□□ -1.33
BRCA1-216ENST00000484087 HNRNPKP61978 463 aaKnown RBP eCLIP6.77□□□□□ -1.33
BRCA1-216ENST00000484087 MXRA7P84157 204 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 SHC2P98077 582 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CDK3Q00526 305 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CHRNA6Q15825 494 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 PFKFB4Q16877 469 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 INAVAQ3KP66 663 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 PLA2G4EQ3MJ16 856 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 DNAL1Q4LDG9 190 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CRTC2Q53ET0 693 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-216ENST00000484087 SH2D4BQ5SQS7 431 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 ZNF678Q5SXM1 525 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 ANKS6Q68DC2 871 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 PNCKQ6P2M8 343 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 EPGNQ6UW88 154 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 TMEM207Q6UWW9 146 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 FRMD7Q6ZUT3 714 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 ASRGL1Q7L266 308 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 TECPR1Q7Z6L1 1165 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 ADAMTSL2Q86TH1 951 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 CUZD1Q86UP6 607 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 NXPE1Q8N323 547 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 PTGR2Q8N8N7 351 aaPredicted RBP6.77□□□□□ -1.33
BRCA1-216ENST00000484087 SIDT2Q8NBJ9 832 aaKnown RBP6.77□□□□□ -1.33
BRCA1-216ENST00000484087 GPR26Q8NDV2 337 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 OR56A4Q8NGH8 313 aa6.77□□□□□ -1.33
BRCA1-216ENST00000484087 ASB12Q8WXK4 309 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms