RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 LMF1Q96S06 567 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 HEMGNQ9BXL5 484 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 FSD1LQ9BXM9 530 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 WDR54Q9H977 334 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 ARNT2Q9HBZ2 717 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 ENAMQ9NRM1 1142 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 OLAHQ9NV23 265 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 CIDEBQ9UHD4 219 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 TRHDEQ9UKU6 1024 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 ASF1AQ9Y294 204 aa12.35□□□□□ -0.43
UBR4-213ENST00000483922 TDRKHQ9Y2W6 561 aaKnown RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 KLF2Q9Y5W3 355 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 ZNF469Q96JG9 3925 aaPredicted RBP12.35□□□□□ -0.43
UBR4-213ENST00000483922 A0A1B0GX78 115 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ISM1B1AKI9 464 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 H7C0S8 307 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 CELA2AP08217 269 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 TPH1P17752 444 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 PSMB4P28070 264 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 HTR1EP28566 365 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 TCEAL1Q15170 157 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ANKRD20A2Q5SQ80 823 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ANKRD20A1Q5TYW2 823 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ANKRD20A3Q5VUR7 823 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ATG9BQ674R7 924 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 MRGPRGQ86SM5 289 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 KLHDC8BQ8IXV7 354 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 OR5K2Q8NHB8 316 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 HEXDCQ8WVB3 486 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 CDKN2AIPNLQ96HQ2 116 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ZNF285Q96NJ3 590 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 DNAJC7Q99615 494 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ZNF160Q9HCG1 818 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 OR6C2Q9NZP2 312 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 STOX2Q9P2F5 926 aaPredicted RBP12.34□□□□□ -0.43
UBR4-213ENST00000483922 ITGB1BP2Q9UKP3 347 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 ALG6Q9Y672 507 aa12.34□□□□□ -0.43
UBR4-213ENST00000483922 OR51F1A6NGY5 319 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 HACD1B0YJ81 288 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 CFAP99D6REC4 459 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 DSCR3O14972 297 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 PRICKLE3O43900 615 aaPredicted RBP12.33□□□□□ -0.44
UBR4-213ENST00000483922 NRP2O60462 931 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 ANXA9O76027 345 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 CRTAMO95727 393 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 AP2A1O95782 977 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 F10P00742 488 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 ITGALP20701 1170 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 SOX11P35716 441 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 SLC1A1P43005 524 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 TNNT3P45378 269 aaPredicted RBP12.33□□□□□ -0.44
UBR4-213ENST00000483922 TNFSF10P50591 281 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 EFNA3P52797 238 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 ADORA2A-AS1P86434 159 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 TUBB8Q3ZCM7 444 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 TFDP3Q5H9I0 405 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 FAM180AQ6UWF9 173 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 TAS2R42Q7RTR8 314 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 HOOK3Q86VS8 718 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 VRK3Q8IV63 474 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 BCORP1Q8N888 145 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 COG1Q8WTW3 980 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 NR4A3Q92570 626 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 KRT35Q92764 455 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 IL17FQ96PD4 163 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 FAM118BQ9BPY3 351 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 C19orf43Q9BQ61 176 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 CUTCQ9NTM9 273 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 NLE1Q9NVX2 485 aaPredicted RBP12.33□□□□□ -0.44
UBR4-213ENST00000483922 IRAK4Q9NWZ3 460 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 IFNKQ9P0W0 207 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 MAU2Q9Y6X3 613 aa12.33□□□□□ -0.44
UBR4-213ENST00000483922 PKDREJQ9NTG1 2253 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 LIN7AO14910 233 aaPredicted RBP12.32□□□□□ -0.44
UBR4-213ENST00000483922 CTSVO60911 334 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 PSMA3P25788 255 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 PKLRP30613 574 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 ARSFP54793 590 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 YBX1P67809 324 aaKnown RBP12.32□□□□□ -0.44
UBR4-213ENST00000483922 KLC1Q07866 573 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 KIR2DS3Q14952 304 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 VWA2Q5GFL6 755 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 KCTD11Q693B1 232 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 FRMPD2BQ6IN97 320 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 GFRALQ6UXV0 394 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 BNC2Q6ZN30 1099 aaPredicted RBP12.32□□□□□ -0.44
UBR4-213ENST00000483922 RHOT2Q8IXI1 618 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 KATNAL2Q8IYT4 538 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 CCDC110Q8TBZ0 833 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 ELMO1Q92556 727 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 HAS2Q92819 552 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 EPS8L2Q9H6S3 715 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 SYNPO2LQ9H987 977 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 SEMA3GQ9NS98 782 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 SMARCAL1Q9NZC9 954 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 PTGFRNQ9P2B2 879 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 POLG2Q9UHN1 485 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 TFR2Q9UP52 801 aa12.32□□□□□ -0.44
UBR4-213ENST00000483922 LOC105369274A0A096LPK9 316 aa12.31□□□□□ -0.44
UBR4-213ENST00000483922 LOC102723532A0A0G2JNH3 316 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms