RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 CYP2A13Q16696 494 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 CCSMST1Q4G0I0 132 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 LRRC8EQ6NSJ5 796 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 INO80CQ6PI98 192 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 CYHR1Q6ZMK1 362 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 TIPARPQ7Z3E1 657 aaKnown RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 SLC26A11Q86WA9 606 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 NLGN4XQ8N0W4 816 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 MNS1Q8NEH6 495 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 NLGN4YQ8NFZ3 816 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 KIF18AQ8NI77 898 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 FBXO25Q8TCJ0 367 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 PYROXD1Q8WU10 500 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 ASB11Q8WXH4 323 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 SLC22A18Q96BI1 424 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 ZNF501Q96CX3 271 aaPredicted RBP17.39■□□□□ 0.37
HDAC6-225ENST00000483506 NDNQ99608 321 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 LRRC1Q9BTT6 524 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 SAYSD1Q9NPB0 183 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 FAM114A2Q9NRY5 505 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 SOHLH2Q9NX45 425 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 TAS2R13Q9NYV9 303 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 ZFATQ9P243 1243 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 SLC39A10Q9ULF5 831 aa17.39■□□□□ 0.37
HDAC6-225ENST00000483506 GFYI3L273 518 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 GSTA2P09210 222 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 PVRP15151 417 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 ZNF28P17035 718 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 CDKN2DP55273 166 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 VAC14Q08AM6 782 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 CUL1Q13616 776 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 MANEAQ5SRI9 462 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 RBM20Q5T481 1227 aaKnown RBP17.38■□□□□ 0.37
HDAC6-225ENST00000483506 CACNA2D3Q8IZS8 1091 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 RAB42Q8N4Z0 105 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 ESX1Q8N693 406 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 C19orf47Q8N9M1 422 aaKnown RBP17.38■□□□□ 0.37
HDAC6-225ENST00000483506 IL17FQ96PD4 163 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 MCMBPQ9BTE3 642 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 ULBP3Q9BZM4 244 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 CPNE5Q9HCH3 593 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 NSMCE4AQ9NXX6 385 aa17.38■□□□□ 0.37
HDAC6-225ENST00000483506 TRMT6Q9UJA5 497 aaKnown RBP17.38■□□□□ 0.37
HDAC6-225ENST00000483506 ISM1B1AKI9 464 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 TIAF1O95411 115 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 CATP04040 527 aaKnown RBP17.37■□□□□ 0.37
HDAC6-225ENST00000483506 FDXRP22570 491 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 GABRA4P48169 554 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 CXADRP78310 365 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 SLC7A5Q01650 507 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 ABHD18Q0P651 414 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 ILF2Q12905 390 aaKnown RBP17.37■□□□□ 0.37
HDAC6-225ENST00000483506 ARHGAP19Q14CB8 494 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 GPR19Q15760 415 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 ZIC1Q15915 447 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 PWWP2BQ6NUJ5 590 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 CCDC81Q6ZN84 652 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 GPR155Q7Z3F1 870 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 TRIM73Q86UV7 250 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 CPNE9Q8IYJ1 553 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 OR9A1PQ8NGU1 263 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 TCTN2Q96GX1 697 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 FANCEQ9HB96 536 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 ZDHHC18Q9NUE0 388 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 CIDEBQ9UHD4 219 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 KLK4Q9Y5K2 254 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 PSAT1Q9Y617 370 aa17.37■□□□□ 0.37
HDAC6-225ENST00000483506 MAP3K7O43318 606 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 KIAA0754O94854 1291 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 C1QAP02745 245 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 MT-ND3P03897 115 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 HSD17B2P37059 387 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 STAT5AP42229 794 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 SRSF6Q13247 344 aaKnown RBP17.36■□□□□ 0.37
HDAC6-225ENST00000483506 HECTD2Q5U5R9 776 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 FAM45BPQ6NSW5 357 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 CDHR3Q6ZTQ4 885 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 PIWIL4Q7Z3Z4 852 aaKnown RBP17.36■□□□□ 0.37
HDAC6-225ENST00000483506 VASH2Q86V25 355 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 ZC3HC1Q86WB0 502 aaKnown RBP17.36■□□□□ 0.37
HDAC6-225ENST00000483506 PALM2Q8IXS6 379 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 IL22RA1Q8N6P7 574 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 LMNTD1Q8N9Z9 388 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 NOA1Q8NC60 698 aaKnown RBP17.36■□□□□ 0.37
HDAC6-225ENST00000483506 FAM45AQ8TCE6 357 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 ELMO2Q96JJ3 720 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 FAM129AQ9BZQ8 928 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 LNPEPQ9UIQ6 1025 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 TSR3Q9UJK0 312 aaKnown RBP17.36■□□□□ 0.37
HDAC6-225ENST00000483506 VWA7Q9Y334 891 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 PCDHB3Q9Y5E6 796 aa17.36■□□□□ 0.37
HDAC6-225ENST00000483506 SPTBP11277 2137 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 TEX51A0A1B0GUA7 166 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 A0A1W2PPV9 198 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 TCRBV9S1A1TA0A576 114 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 ESYT3A0FGR9 886 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 CTAGE15A4D2H0 777 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 KRT87PA6NCN2 255 aa17.35■□□□□ 0.37
HDAC6-225ENST00000483506 H3BMH7 237 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms