RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TOR4AQ9NXH8 423 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 OGFRQ9NZT2 677 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 TMEM9Q9P0T7 183 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.83□□□□□ -0.36
HDAC1-208ENST00000482310 XPR1Q9UBH6 696 aa12.83□□□□□ -0.36
HDAC1-208ENST00000482310 MAP1BP46821 2468 aaKnown RBP12.83□□□□□ -0.36
HDAC1-208ENST00000482310 A0A1W2PQM1 296 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 A8MU76 341 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 ISM1B1AKI9 464 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 MYO1CO00159 1063 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 BTN3A3O00478 584 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 COPEO14579 308 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 TM4SF5O14894 197 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SLC16A5O15375 505 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 KDM1AO60341 852 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SASH3O75995 380 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 KCNK5O95279 499 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SLC16A8O95907 504 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 S100BP04271 92 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 CSRP1P21291 193 aaKnown RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SHMT2P34897 504 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 CAPZBP47756 277 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 KCNC1P48547 511 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 RAB28P51157 221 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SPIDRQ14159 915 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 RASA2Q15283 850 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 PPP1R3AQ16821 1122 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 TSNAXIP1Q2TAA8 658 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 TECRLQ5HYJ1 363 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 N4BP2L1Q5TBK1 243 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 CDHR3Q6ZTQ4 885 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 FAM92BQ6ZTR7 304 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 CCDC91Q7Z6B0 441 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 CLEC14AQ86T13 490 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 ISCA2Q86U28 154 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 TRIM73Q86UV7 250 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 FAM20CQ8IXL6 584 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 CCDC63Q8NA47 563 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 LINC01555Q8NAE3 123 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 ACMSDQ8TDX5 336 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 DENND1AQ8TEH3 1009 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 KIAA1191Q96A73 305 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 GPR78Q96P69 363 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 GFM1Q96RP9 751 aaKnown RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SMC6Q96SB8 1091 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 ACAT2Q9BWD1 397 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 KLHL25Q9H0H3 589 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 TFB2MQ9H5Q4 396 aaKnown RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 ZNF446Q9NWS9 450 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 SPHK1Q9NYA1 384 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 WWOXQ9NZC7 414 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 TMEM216Q9P0N5 145 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 STOX2Q9P2F5 926 aaPredicted RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 LNPEPQ9UIQ6 1025 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 NOVA2Q9UNW9 492 aaKnown RBP12.82□□□□□ -0.36
HDAC1-208ENST00000482310 OARD1Q9Y530 152 aa12.82□□□□□ -0.36
HDAC1-208ENST00000482310 OR5K3A6NET4 321 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 AGPSO00116 658 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 KERAO60938 352 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 GLRA3O75311 464 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 CHRM5P08912 532 aaPredicted RBP12.81□□□□□ -0.36
HDAC1-208ENST00000482310 GFAPP14136 432 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 PNLIPP16233 465 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 CD1CP29017 333 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 IMPA1P29218 277 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 GPR3P46089 330 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 KPNA2P52292 529 aaKnown RBP12.81□□□□□ -0.36
HDAC1-208ENST00000482310 PNLIPRP1P54315 467 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 EPHA4P54764 986 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 PRKAA1Q13131 559 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 NR1D2Q14995 579 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 ACAP2Q15057 778 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 TGFBIQ15582 683 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 THEMIS2Q5TEJ8 643 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 TMPRSS9Q7Z410 1059 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 ADGRF3Q8IZF5 1079 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 STAG3L4Q8TBR4 150 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 ZNF480Q8WV37 535 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 ANKRD7Q92527 254 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 ESAMQ96AP7 390 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 PYCR2Q96C36 320 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 APOPT1Q96IL0 206 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 PPM1MQ96MI6 270 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 RTKNQ9BST9 563 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 MENTQ9BUN1 341 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 RAB11FIP5Q9BXF6 653 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 IQCGQ9H095 443 aaKnown RBP12.81□□□□□ -0.36
HDAC1-208ENST00000482310 UCK1Q9HA47 277 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 TMBIM4Q9HC24 238 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 ACTR10Q9NZ32 417 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 SPATA7Q9P0W8 599 aa12.81□□□□□ -0.36
HDAC1-208ENST00000482310 PIPSLA2A3N6 862 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 CAPN5O15484 640 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ZW10O43264 779 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 OPA1O60313 960 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 RASSF9O75901 435 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 GP1BAP07359 652 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ANXA5P08758 320 aa12.8□□□□□ -0.36
HDAC1-208ENST00000482310 ENO2P09104 434 aaPredicted RBP12.8□□□□□ -0.36
HDAC1-208ENST00000482310 COL6A2P12110 1019 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms