RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 PEX12O00623 359 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 PJA2O43164 708 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 UMODP07911 640 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 UGT2B7P16662 529 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 ACRV1P26436 265 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 FOLR3P41439 243 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 CA7P43166 264 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 MAGEA1P43355 309 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 GABRA4P48169 554 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 DCDP81605 110 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 LTBQ06643 244 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 PRPSAP1Q14558 356 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 SSPNQ14714 243 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 SLC9A5Q14940 896 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 DBN1Q16643 649 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 GPR33Q49SQ1 333 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 ANKRD20A2Q5SQ80 823 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 ANKRD20A1Q5TYW2 823 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 ANKRD20A3Q5VUR7 823 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 RHBDD2Q6NTF9 364 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 C11orf63Q6NUN7 778 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 GFRALQ6UXV0 394 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 PPP1R32Q7Z5V6 425 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 HOOK3Q86VS8 718 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 CDKL3Q8IVW4 592 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 OR5AR1Q8NGP9 310 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 OR2Y1Q8NGV0 311 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 N4BP2L2Q92802 583 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 MTFMTQ96DP5 389 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 SPATA13Q96N96 652 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 OR2A14Q96R47 310 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 FAM118BQ9BPY3 351 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 C19orf43Q9BQ61 176 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 TBL1YQ9BQ87 522 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 CHRNA10Q9GZZ6 450 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 ARNT2Q9HBZ2 717 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 SPHK1Q9NYA1 384 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 IFT80Q9P2H3 777 aaPredicted RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 DHCR7Q9UBM7 475 aaKnown RBP9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 TFR2Q9UP52 801 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 CDYLQ9Y232 598 aa9.07□□□□□ -0.96
SMARCE1-210ENST00000481231 FER1L5A0AVI2 2057 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 MAP1AP78559 2803 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 KLHL41O60662 606 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 STK10O94804 968 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 UNC5CO95185 931 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 CHRM5P08912 532 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 GSTM1P09488 218 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 TPBGLP0DKB5 382 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 RBP3P10745 1247 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 SHMT2P34897 504 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 EIF3EP60228 445 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 PPP2R2AP63151 447 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 CSNK1G2P78368 415 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 GSTM4Q03013 218 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 NKAIN1Q4KMZ8 207 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 B3GNTL1Q67FW5 361 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 ZNF324BQ6AW86 544 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 ZNF449Q6P9G9 518 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 DARS2Q6PI48 645 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 XKRXQ6PP77 449 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 TMEM207Q6UWW9 146 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 UNC5AQ6ZN44 842 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 TAS2R42Q7RTR8 314 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 CNGA4Q8IV77 575 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 KLHDC8BQ8IXV7 354 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 ZNF655Q8N720 491 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 CATSPER1Q8NEC5 780 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 FLVCR1-AS1Q8TAF5 88 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 PROKR1Q8TCW9 393 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 TAAR6Q96RI8 345 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 FERMT1Q9BQL6 677 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 AP1M1Q9BXS5 423 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 SLC22A11Q9NSA0 550 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 SMARCAL1Q9NZC9 954 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 OR6C2Q9NZP2 312 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 NDOR1Q9UHB4 597 aa9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 GPN3Q9UHW5 284 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 FEZ2Q9UHY8 353 aaPredicted RBP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.06□□□□□ -0.96
SMARCE1-210ENST00000481231 A0A0J9YY10 115 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 FAM221AA4D161 298 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 AKR1B15C9JRZ8 316 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 H7C0S8 307 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 LIN7AO14910 233 aaPredicted RBP9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 AP2A2O94973 939 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 IGHEP01854 428 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 TPH1P17752 444 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 ITGAXP20702 1163 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 CTNNA2P26232 953 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 ACADLP28330 430 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 PEBP1P30086 187 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 CTNNA1P35221 906 aaKnown RBP9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 PTPN7P35236 360 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 IST1P53990 364 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 SOX8P57073 446 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 COPS2P61201 443 aa9.05□□□□□ -0.96
SMARCE1-210ENST00000481231 CACNG1Q06432 222 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms