RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 SLC35G2Q8TBE7 412 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 LINC00615Q96LM1 132 aaPredicted RBP10.37□□□□□ -0.75
CCDC58-205ENST00000479899 FCRL5Q96RD9 977 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 SLC6A20Q9NP91 592 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 TMEM63CQ9P1W3 806 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 CDC23Q9UJX2 597 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 MKL2Q9ULH7 1088 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 CAPN11Q9UMQ6 739 aa10.37□□□□□ -0.75
CCDC58-205ENST00000479899 LUC7L2Q9Y383 392 aaKnown RBP10.37□□□□□ -0.75
CCDC58-205ENST00000479899 PCM1Q15154 2024 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ADGRG4Q8IZF6 3080 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 C2orf81A6NN90 581 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ZSCAN9O15535 394 aaPredicted RBP10.36□□□□□ -0.75
CCDC58-205ENST00000479899 SPOPO43791 374 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 MBD3O95983 291 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 EPOP01588 193 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 UMODP07911 640 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 TMEM253P0C7T8 217 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 MSL3P1P0C860 447 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 PYGMP11217 842 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ITGALP20701 1170 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 PBX1P40424 430 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 UBASH3AP57075 661 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 TPM4P67936 248 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 IRAK1BP1Q5VVH5 260 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 RHBDD2Q6NTF9 364 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 CLEC17AQ6ZS10 378 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 BZW1Q7L1Q6 419 aaKnown RBP10.36□□□□□ -0.75
CCDC58-205ENST00000479899 CCDC50Q8IVM0 306 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ADGRF3Q8IZF5 1079 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 DNAJB14Q8TBM8 379 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 PROKR1Q8TCW9 393 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 GRHL3Q8TE85 626 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 PTERQ96BW5 349 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ULK4Q96C45 1275 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 COPS8Q99627 209 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 RBCK1Q9BYM8 510 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 OR52A5Q9H2C5 316 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 C10orf88Q9H8K7 445 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 FBXL4Q9UKA2 621 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 PLAGL1Q9UM63 463 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ICKQ9UPZ9 632 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 ENTPD4Q9Y227 616 aa10.36□□□□□ -0.75
CCDC58-205ENST00000479899 TDRKHQ9Y2W6 561 aaKnown RBP10.36□□□□□ -0.75
CCDC58-205ENST00000479899 MACROD2A1Z1Q3 448 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 KLHL33A6NCF5 533 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 AGPSO00116 658 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 EDN3P14138 238 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 ATP1B2P14415 290 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 MC4RP32245 332 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 CDKN2BP42772 138 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 NR2C2P49116 596 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 CDKN1CP49918 316 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 GEMP55040 296 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 AIMP2Q13155 320 aaKnown RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 BOP1Q14137 746 aaKnown RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 TFDP2Q14188 446 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 ZNF169Q14929 603 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 BRD3Q15059 726 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 TAF1AQ15573 450 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 ZIC1Q15915 447 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 SLC18A3Q16572 532 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 NKAIN1Q4KMZ8 207 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 PRAMEF13Q5VWM6 474 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 SP5Q6BEB4 398 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 ZNF449Q6P9G9 518 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 FAM180AQ6UWF9 173 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 LINC00114Q6XXX2 140 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 SHISA6Q6ZSJ9 500 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 LUZP1Q86V48 1076 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 VSIG1Q86XK7 387 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 FAM20CQ8IXL6 584 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 NXPE1Q8N323 547 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 OR5AR1Q8NGP9 310 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 PPP4R1Q8TF05 950 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 P3H4Q92791 437 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 MAGEB10Q96LZ2 347 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 DMRTB1Q96MA1 342 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 QKIQ96PU8 341 aaKnown RBP eCLIP10.35□□□□□ -0.757e-10■■■■□ 23.6
CCDC58-205ENST00000479899 BARD1Q99728 777 aaKnown RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 ANP32EQ9BTT0 268 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 NDC1Q9BTX1 674 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 AP1M1Q9BXS5 423 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 TFB2MQ9H5Q4 396 aaKnown RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 SOX17Q9H6I2 414 aaPredicted RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 EPS8L2Q9H6S3 715 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 MVB12BQ9H7P6 319 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 SPTLC3Q9NUV7 552 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 DDX56Q9NY93 547 aaKnown RBP10.35□□□□□ -0.75
CCDC58-205ENST00000479899 SPHK1Q9NYA1 384 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 AP1M2Q9Y6Q5 423 aa10.35□□□□□ -0.75
CCDC58-205ENST00000479899 A0A0J9YY10 115 aa10.34□□□□□ -0.75
CCDC58-205ENST00000479899 CCDC78A2IDD5 438 aa10.34□□□□□ -0.75
CCDC58-205ENST00000479899 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
CCDC58-205ENST00000479899 AKR1B10O60218 316 aa10.34□□□□□ -0.75
CCDC58-205ENST00000479899 SNRPB2P08579 225 aaKnown RBP10.34□□□□□ -0.75
CCDC58-205ENST00000479899 PRSS56P0CW18 603 aa10.34□□□□□ -0.75
CCDC58-205ENST00000479899 SHMT2P34897 504 aa10.34□□□□□ -0.75
CCDC58-205ENST00000479899 SOX18P35713 384 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms