RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 EPHA6Q9UF33 1036 aa14.73□□□□□ -0.05
COL16A1-211ENST00000479100 TLK1Q9UKI8 766 aa14.73□□□□□ -0.05
COL16A1-211ENST00000479100 RAB21Q9UL25 225 aa14.73□□□□□ -0.05
COL16A1-211ENST00000479100 NBEAQ8NFP9 2946 aa14.73□□□□□ -0.05
COL16A1-211ENST00000479100 MN1Q10571 1320 aaPredicted RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 CCDC187A0A096LP49 1063 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 HMX2A2RU54 273 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SMIM23A6NLE4 172 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 TRIM49D1C9J1S8 452 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 MYO1CO00159 1063 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 CDC7O00311 574 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SLC16A5O15375 505 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 C9P02748 559 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SHBGP04278 402 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 HIST1H2AGP0C0S8 130 aaPredicted RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 THRAP10827 490 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 HIST1H2ADP20671 130 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 CDH3P22223 829 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 TYK2P29597 1187 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 CSTF2P33240 577 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 GMPRP36959 345 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 ARL4DP49703 201 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 KPNA2P52292 529 aaKnown RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SP140Q13342 867 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 TRA2AQ13595 282 aaKnown RBP eCLIP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 CSHL1Q14406 222 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 C16orf72Q14CZ0 275 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 RTP5Q14D33 572 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 ZKSCAN8Q15776 578 aaPredicted RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 C3orf38Q5JPI3 329 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 LGSNQ5TDP6 509 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 FBXO38Q6PIJ6 1188 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 RAB11FIP2Q7L804 512 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 TBC1D1Q86TI0 1168 aaPredicted RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 OR2L8Q8NGY9 312 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 HNRNPLLQ8WVV9 542 aaKnown RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 DLG3Q92796 817 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 CAVIN3Q969G5 261 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 GRAMD1AQ96CP6 724 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 PDLIM5Q96HC4 596 aaKnown RBP14.72□□□□□ -0.05
COL16A1-211ENST00000479100 HIST1H2AHQ96KK5 128 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 MAP3K3Q99759 626 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 HIST1H2AJQ99878 128 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 H2AFJQ9BTM1 129 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SLC12A9Q9BXP2 914 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 TRIM54Q9BYV2 358 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 RAB33BQ9H082 229 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 VPS11Q9H270 941 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 PARVBQ9HBI1 364 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 ABCF3Q9NUQ8 709 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SPHK1Q9NYA1 384 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 SPATA7Q9P0W8 599 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 PDP2Q9P2J9 529 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 ZNF180Q9UJW8 692 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 IKZF3Q9UKT9 509 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 PDE10AQ9Y233 779 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 LOXL2Q9Y4K0 774 aa14.72□□□□□ -0.05
COL16A1-211ENST00000479100 MATN2O00339 956 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 MPOP05164 745 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 C2P06681 752 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 SNRPAP09012 282 aaKnown RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 CNTFP26441 200 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 GCAP28676 217 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 PRDX3P30048 256 aaKnown RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 PNLIPRP1P54315 467 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 PHKG1Q16816 387 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 TAF1BQ53T94 588 aaPredicted RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 ANKS6Q68DC2 871 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 MBOAT1Q6ZNC8 495 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 FRA10AC1Q70Z53 315 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 TRIM73Q86UV7 250 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 FAM129CQ86XR2 697 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 RASGRP3Q8IV61 690 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 SYTL1Q8IYJ3 562 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 FBXO39Q8N4B4 442 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 LINC01555Q8NAE3 123 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 FBXO15Q8NCQ5 510 aaPredicted RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 AGBL5Q8NDL9 886 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 WDR36Q8NI36 951 aaKnown RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 DENND1AQ8TEH3 1009 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 LIN37Q96GY3 246 aaPredicted RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 PPM1MQ96MI6 270 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 CD180Q99467 661 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 CMKLR1Q99788 373 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 NRSN2Q9GZP1 204 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 DERL2Q9GZP9 239 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 KLHL25Q9H0H3 589 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 UTP6Q9NYH9 597 aaKnown RBP14.71□□□□□ -0.05
COL16A1-211ENST00000479100 TBK1Q9UHD2 729 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 POMT2Q9UKY4 750 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 SATB2Q9UPW6 733 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 ACOT9Q9Y305 439 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 AK5Q9Y6K8 562 aa14.71□□□□□ -0.05
COL16A1-211ENST00000479100 A0A087X1B8 175 aa14.7□□□□□ -0.06
COL16A1-211ENST00000479100 A0A096LPK6 155 aa14.7□□□□□ -0.06
COL16A1-211ENST00000479100 PMS2P1A4D2B8 440 aa14.7□□□□□ -0.06
COL16A1-211ENST00000479100 TLCD2A6NGC4 264 aa14.7□□□□□ -0.06
COL16A1-211ENST00000479100 ZNF839A8K0R7 811 aa14.7□□□□□ -0.06
COL16A1-211ENST00000479100 WISP3O95389 354 aaPredicted RBP14.7□□□□□ -0.06
COL16A1-211ENST00000479100 GUCA1CO95843 209 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms