RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 DUX1O43812 170 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 OPA1O60313 960 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 KDM1AO60341 852 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 KCNK5O95279 499 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 GSTA1P08263 222 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 CHRM5P08912 532 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 SBK3P0C264 359 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 NCF1P14598 390 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 CREB1P16220 341 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 POLR2CP19387 275 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 PNLIPRP1P54315 467 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 GFERP55789 205 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 CLDN6P56747 220 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 CDKL1Q00532 357 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 ILKQ13418 452 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 FASTKQ14296 549 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 CYP2A13Q16696 494 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 ZXDCQ2QGD7 858 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 ANKS6Q68DC2 871 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 C16orf46Q6P387 395 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 OOSP2Q86WS3 158 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 LRRC56Q8IYG6 542 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 BANPQ8N9N5 519 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 PPFIBP2Q8ND30 876 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 HMGCLL1Q8TB92 370 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 STAG3L4Q8TBR4 150 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 FBXL8Q96CD0 374 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 APOPT1Q96IL0 206 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 SCYL1Q96KG9 808 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 CCDC138Q96M89 665 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 TSNARE1Q96NA8 513 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 C12orf65Q9H3J6 166 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 EPB41L1Q9H4G0 881 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 TMBIM4Q9HC24 238 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 MKS1Q9NXB0 559 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 SPHK1Q9NYA1 384 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 OR6C2Q9NZP2 312 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 TMEM216Q9P0N5 145 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 TMEM9Q9P0T7 183 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 EMCNQ9ULC0 261 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 PCDHGA1Q9Y5H4 931 aa13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 MN1Q10571 1320 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-207ENST00000478769 A0A1W2PPV9 198 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 CCDC189A1A4V9 331 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 PABPN1LA6NDY0 278 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 GOLGA6L10A6NI86 522 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SUPT3HB4E1H0 165 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 COPEO14579 308 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 GLRA3O75311 464 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SPAG7O75391 227 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SUPT3HO75486 399 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 HIST1H2AGP0C0S8 130 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 MTHFD2P13995 350 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 AMD1P17707 334 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 HIST1H2ADP20671 130 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SDHBP21912 280 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 CRHR1P34998 444 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 PPM1FP49593 454 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 KPNA2P52292 529 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 PDX1P52945 283 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 TBPL1P62380 186 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SQSTM1Q13501 440 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 ARHGAP19Q14CB8 494 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 C18orf21Q32NC0 220 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 N4BP2L1Q5TBK1 243 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 DHRS13Q6UX07 377 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 USP53Q70EK8 1073 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SYTL1Q8IYJ3 562 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 TMEM151AQ8N4L1 468 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 RAB42Q8N4Z0 105 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 PDPRQ8NCN5 879 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 FLVCR1-AS1Q8TAF5 88 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 NCSTNQ92542 709 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 AHCYL2Q96HN2 611 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 HIST1H2AHQ96KK5 128 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 GFM1Q96RP9 751 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 HIST1H2AJQ99878 128 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 EGFL8Q99944 293 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 MRPL57Q9BQC6 102 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 TMEM79Q9BSE2 394 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 H2AFJQ9BTM1 129 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 TRIM54Q9BYV2 358 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 ZMYND15Q9H091 742 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 MRPL46Q9H2W6 279 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 HRASLS2Q9NWW9 162 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 NUDT4Q9NZJ9 180 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 CD274Q9NZQ7 290 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SENP1Q9P0U3 644 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 SPTBN2O15020 2390 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 ANKRD12Q6UB98 2062 aa13.11□□□□□ -0.31
NUDCD3-207ENST00000478769 PIPSLA2A3N6 862 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 GSAPA4D1B5 854 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 SYCE1LA8MT33 242 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 TARM1B6A8C7 271 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 E7ENX8 843 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 ZW10O43264 779 aa13.1□□□□□ -0.31
NUDCD3-207ENST00000478769 CPNE6O95741 557 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms