RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ZNF395Q9H8N7 513 aaPredicted RBP6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 BPIFA1Q9NP55 256 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 EURLQ9NYK6 297 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 METRNQ9UJH8 293 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 TTLL3Q9Y4R7 772 aa6.99□□□□□ -1.29
SPTLC1-205ENST00000477888 HIVEP2P31629 2446 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 IGHV1-45A0A0A0MS14 117 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 TMEM191CA6NGB0 347 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RNF212BA8MTL3 300 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 DSCR3O14972 297 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 WIPF1O43516 503 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SGTAO43765 313 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 GADD45BO75293 160 aaPredicted RBP6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RNF8O76064 485 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RAF1P04049 648 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 ZGLP1P0C6A0 271 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 ATP1A3P13637 1013 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 TCF4P15884 667 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RAB28P51157 221 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 LONRF2Q1L5Z9 754 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 BOLA3Q53S33 107 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SWT1Q5T5J6 900 aaKnown RBP6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 GPRC6AQ5T6X5 926 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 ABHD17BQ5VST6 288 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 TMEM211Q6ICI0 200 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 ACAD10Q6JQN1 1059 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 TIGD7Q6NT04 549 aaPredicted RBP6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SARM1Q6SZW1 724 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 PAMR1Q6UXH9 720 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 NLRP9Q7RTR0 991 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 LAPTM4BQ86VI4 370 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 MCATQ8IVS2 390 aaKnown RBP6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 ZZZ3Q8IYH5 903 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 CFAP206Q8IYR0 622 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 DEPDC4Q8N2C3 294 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 CIARTQ8N365 385 aaPredicted RBP6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 DTWD1Q8N5C7 304 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 CNTD1Q8N815 330 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 PHC3Q8NDX5 983 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 MDS2Q8NDY4 140 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 NAT14Q8WUY8 206 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RND1Q92730 232 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SCMH1Q96GD3 660 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 RBM41Q96IZ5 413 aaKnown RBP6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SIGLEC12Q96PQ1 595 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 HES7Q9BYE0 225 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 GANQ9H2C0 597 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 CLSTN2Q9H4D0 955 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 CUTCQ9NTM9 273 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 IRAK4Q9NWZ3 460 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SPHK1Q9NYA1 384 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 IL1RAPL1Q9NZN1 696 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 C3orf18Q9UK00 162 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 SPO11Q9Y5K1 396 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 CCDC88CQ9P219 2028 aa6.98□□□□□ -1.29
SPTLC1-205ENST00000477888 ANKRD12Q6UB98 2062 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 IGLV3-12A0A075B6K2 115 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 LOC102723996A0A087X1L8 192 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 A0A0J9YY10 115 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 GAPDHSO14556 408 aaPredicted RBP6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 FBXO45P0C2W1 286 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 PYGMP11217 842 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 EEF1DP29692 281 aaKnown RBP6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 PCK1P35558 622 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 CD96P40200 585 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 SERPINB4P48594 390 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 PPP2R2BQ00005 443 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF33BQ06732 778 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 PRKG2Q13237 762 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 TUBA3CQ13748 450 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 IFI16Q16666 785 aaKnown RBP6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 BCL7AQ4VC05 210 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 YOD1Q5VVQ6 348 aaPredicted RBP6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 TUBA3EQ6PEY2 450 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 CNSTQ6PJW8 725 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 UNC5AQ6ZN44 842 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 NEK10Q6ZWH5 1172 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 DET1Q7L5Y6 550 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 DAAM2Q86T65 1068 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 HOOK3Q86VS8 718 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 PRSS58Q8IYP2 241 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 RPRMLQ8N4K4 120 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 MYRIPQ8NFW9 859 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 GOT1L1Q8NHS2 421 aaPredicted RBP6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 FAM57AQ8TBR7 257 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 TADA1Q96BN2 335 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 MIEF2Q96C03 454 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 IMMP1LQ96LU5 166 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF285Q96NJ3 590 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 OR52A5Q9H2C5 316 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 MVB12BQ9H7P6 319 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 NLRC4Q9NPP4 1024 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 KLHL1Q9NR64 748 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 PARVAQ9NVD7 372 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 RIC8BQ9NVN3 520 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 HAUS2Q9NVX0 235 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 SMOXQ9NWM0 555 aa6.97□□□□□ -1.29
SPTLC1-205ENST00000477888 TAS2R14Q9NYV8 317 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms