RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MCOLN3Q8TDD5 553 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 RSC1A1Q92681 617 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 KIAA1191Q96A73 305 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 SCYL1Q96KG9 808 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 IL17FQ96PD4 163 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 SLC12A9Q9BXP2 914 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 TRIM54Q9BYV2 358 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 VIPAS39Q9H9C1 493 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 RNF112Q9ULX5 631 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 NOVA2Q9UNW9 492 aaKnown RBP14.87□□□□□ -0.03
SEC13-215ENST00000477547 MSRB2Q9Y3D2 182 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 OARD1Q9Y530 152 aa14.87□□□□□ -0.03
SEC13-215ENST00000477547 PTPRBP23467 1997 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 IGHV1OR21-1A0A087WYE8 117 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 SPAARA0A1B0GVQ0 90 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 FAM221BA6H8Z2 402 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 ZW10O43264 779 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 KERAO60938 352 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 GLRA3O75311 464 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 UBXN7O94888 489 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 HIST1H2AGP0C0S8 130 aaPredicted RBP14.86□□□□□ -0.03
SEC13-215ENST00000477547 TYRP1P17643 537 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 KRT4P19013 534 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 HIST1H2ADP20671 130 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 CAPZBP47756 277 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 RAB28P51157 221 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 AP1S2P56377 157 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 GPLD1P80108 840 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 AMZ1Q400G9 498 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 TECRLQ5HYJ1 363 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 TAX1BP1Q86VP1 789 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 LCA5Q86VQ0 697 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 AMIGO1Q86WK6 493 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 OOSP2Q86WS3 158 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 PGM2Q96G03 612 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 AHCYL2Q96HN2 611 aaKnown RBP14.86□□□□□ -0.03
SEC13-215ENST00000477547 APOPT1Q96IL0 206 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 HIST1H2AHQ96KK5 128 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 PKP4Q99569 1192 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 NRTNQ99748 197 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 HIST1H2AJQ99878 128 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 EGFL8Q99944 293 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 H2AFJQ9BTM1 129 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 STMN4Q9H169 189 aaPredicted RBP14.86□□□□□ -0.03
SEC13-215ENST00000477547 SRMSQ9H3Y6 488 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 EPB41L1Q9H4G0 881 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 TFB2MQ9H5Q4 396 aaKnown RBP14.86□□□□□ -0.03
SEC13-215ENST00000477547 ZNF358Q9NW07 568 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 ARL15Q9NXU5 204 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 SENP1Q9P0U3 644 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 XPR1Q9UBH6 696 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 LAMA5O15230 3695 aa14.86□□□□□ -0.03
SEC13-215ENST00000477547 HEATR5BQ9P2D3 2071 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SUPT3HB4E1H0 165 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 TK2O00142 265 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 COPEO14579 308 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SUPT3HO75486 399 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 GUCA1CO95843 209 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SLC16A8O95907 504 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 S100BP04271 92 aaPredicted RBP14.85□□□□□ -0.03
SEC13-215ENST00000477547 GSTA1P08263 222 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 TPBGLP0DKB5 382 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 AMD1P17707 334 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 CSF2RBP32927 897 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SIM1P81133 766 aaPredicted RBP14.85□□□□□ -0.03
SEC13-215ENST00000477547 ILKQ13418 452 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 ACAP2Q15057 778 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 ANKS6Q68DC2 871 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 KLHL35Q6PF15 583 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 ISCA2Q86U28 154 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 GPSM1Q86YR5 675 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SYTL1Q8IYJ3 562 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 OR4E2Q8NGC2 313 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 STAG3L4Q8TBR4 150 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 DENND1AQ8TEH3 1009 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 GPR78Q96P69 363 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SMC6Q96SB8 1091 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 ATOH8Q96SQ7 321 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 MENTQ9BUN1 341 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 MKS1Q9NXB0 559 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 TOR4AQ9NXH8 423 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 OGFRQ9NZT2 677 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 STOX2Q9P2F5 926 aaPredicted RBP14.85□□□□□ -0.03
SEC13-215ENST00000477547 PCDHGA1Q9Y5H4 931 aa14.85□□□□□ -0.03
SEC13-215ENST00000477547 SMG1Q96Q15 3661 aaKnown RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 A0A1W2PQM1 296 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 CCDC189A1A4V9 331 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 GSAPA4D1B5 854 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 OR6C74A6NCV1 312 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 OR5K3A6NET4 321 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 NCF1BA6NI72 391 aaPredicted RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 NCF1CA8MVU1 366 aaPredicted RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 CASC3O15234 703 aaKnown RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 SASH3O75995 380 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 FTH1P19P0C7X4 201 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 ERGP11308 486 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 NCF1P14598 390 aaPredicted RBP14.84□□□□□ -0.03
SEC13-215ENST00000477547 IMPA1P29218 277 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 CCL7P80098 99 aa14.84□□□□□ -0.03
SEC13-215ENST00000477547 CDKL1Q00532 357 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms