RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 TPM1P09493 284 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 ESRRAP11474 423 aaPredicted RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 ACPPP15309 386 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 ITGAXP20702 1163 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 MCM3P25205 808 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 HTR1EP28566 365 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 ANP32AP39687 249 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 GRIA3P42263 894 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC1A1P43005 524 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 ARSFP54793 590 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SOX8P57073 446 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 VSX2P58304 361 aaPredicted RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 OTUD4Q01804 1114 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 OCA2Q04671 838 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 RPA4Q13156 261 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 MFAP5Q13361 173 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 IQCB1Q15051 598 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 NKG7Q16617 165 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC5A12Q1EHB4 618 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 LRRC38Q5VT99 294 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 FCRL6Q6DN72 434 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 FAAH2Q6GMR7 532 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 DARS2Q6PI48 645 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 KIRREL2Q6UWL6 708 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 TMEM207Q6UWW9 146 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 OVCH1Q7RTY7 1134 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 MRGPRGQ86SM5 289 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 TMTC1Q8IUR5 882 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 MCATQ8IVS2 390 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 TBC1D21Q8IYX1 336 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SIRT6Q8N6T7 355 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 LMNTD1Q8N9Z9 388 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 OR5K2Q8NHB8 316 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SUN3Q8TAQ9 357 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 DENND1AQ8TEH3 1009 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 FKBP10Q96AY3 582 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 C8orf44Q96CB5 159 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 CCDC120Q96HB5 630 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 BARD1Q99728 777 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 FAM118BQ9BPY3 351 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 TBL1YQ9BQ87 522 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 GOLPH3Q9H4A6 298 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 OCEL1Q9H607 264 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 WDR54Q9H977 334 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SEMA3GQ9NS98 782 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SLC22A11Q9NSA0 550 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 CUTCQ9NTM9 273 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 INTS7Q9NVH2 962 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SEC14L3Q9UDX4 400 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 NENFQ9UMX5 172 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 AAR2Q9Y312 384 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.41□□□□□ -1.382e-9■■■□□ 14.9
RTFDC1-206ENST00000477485 HS3ST3B1Q9Y662 390 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 PKDREJQ9NTG1 2253 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SCN2AQ99250 2005 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 hCG_1818297A0A087WSY0 165 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 NSG1A0A0A6YYJ2 146 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 H3BMH7 237 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 LIN7AO14910 233 aaPredicted RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PSTPIP1O43586 416 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 DIAPH2O60879 1101 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 KLHL18O94889 574 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ZRANB2O95218 330 aaKnown RBP eCLIP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 EIF2S1P05198 315 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 TPM3P06753 285 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ERVK-10P10266 1014 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 TPH1P17752 444 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CXCR2P25025 360 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PEBP1P30086 187 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PTGER4P35408 488 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 PBX1P40424 430 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 NSG1P42857 185 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 GABRA4P48169 554 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF140P52738 457 aaPredicted RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CASP6P55212 293 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 EEF1A2Q05639 463 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 RBPJQ06330 500 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CACNG1Q06432 222 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 KLC1Q07866 573 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 Q0VFX4 171 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ART3Q13508 389 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 GRM7Q14831 915 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 POU6F1Q14863 301 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 KIR2DS3Q14952 304 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 SF1Q15637 639 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 DBN1Q16643 649 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 GPR33Q49SQ1 333 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ZC3H12BQ5HYM0 836 aaKnown RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ANKRD20A2Q5SQ80 823 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ANKRD20A1Q5TYW2 823 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 ANKRD20A3Q5VUR7 823 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CNSTQ6PJW8 725 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CLEC17AQ6ZS10 378 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 NLRP9Q7RTR0 991 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 CDKL3Q8IVW4 592 aaPredicted RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 KBTBD2Q8IY47 623 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 DNAJC22Q8N4W6 341 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 DTWD1Q8N5C7 304 aa6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 TAB3Q8N5C8 712 aaPredicted RBP6.4□□□□□ -1.38
RTFDC1-206ENST00000477485 OR11G2Q8NGC1 345 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms