RNA–Protein interactions for RNA: ENST00000476932.5

LIMS2-214, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-214ENST00000476932 AP3M1Q9Y2T2 418 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 PPIL1Q9Y3C6 166 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 FOXD2O60548 495 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 PRAMEF4O60810 478 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 HTR1AP08908 422 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 SDC1P18827 310 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 AOAHP28039 575 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 SLC6A12P48065 614 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 NEK2P51955 445 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 CTU2Q2VPK5 515 aaKnown RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 RBM48Q5RL73 367 aaKnown RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 MPP7Q5T2T1 576 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 BROXQ5VW32 411 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 PRAMEF9Q5VWM5 478 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 TTC23Q5W5X9 447 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 NEK5Q6P3R8 708 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 SPESP1Q6UW49 350 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 UBE2R2Q712K3 238 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 ZNF551Q7Z340 670 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 R3HCC1LQ7Z5L2 792 aaKnown RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 VRK3Q8IV63 474 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 SELENOMQ8WWX9 145 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 TANKQ92844 425 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 TMEM169Q96HH4 297 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 MCCC1Q96RQ3 725 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 MAGIXQ9H6Y5 334 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 PARVBQ9HBI1 364 aa20.52■□□□□ 0.88
LIMS2-214ENST00000476932 NUP214P35658 2090 aaPredicted RBP20.52■□□□□ 0.88
LIMS2-214ENST00000476932 ABCB7O75027 752 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 GSNP06396 782 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 PRPH2P23942 346 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 EEF1B2P24534 225 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 DCTP40126 519 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 KCNAB2Q13303 367 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 BOP1Q14137 746 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 MPPE1Q53F39 396 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 TMCO2Q7Z6W1 182 aaPredicted RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 ANKRD46Q86W74 232 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 DNAJB8Q8NHS0 232 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 SNX19Q92543 992 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 HDAC2Q92769 488 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 NCLNQ969V3 563 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 SLC12A9Q9BXP2 914 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 PLGRKTQ9HBL7 147 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 MRPL17Q9NRX2 175 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 CREBZFQ9NS37 354 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 KRT87PA6NCN2 255 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 SERPINA1P01009 418 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 CKMP06732 381 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 C1SP09871 688 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 GABRR2P28476 465 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 SLC14A1Q13336 389 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 SPOUT1Q5T280 376 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 TTC23LQ6PF05 361 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 METTL3Q86U44 580 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 ZCCHC7Q8N3Z6 543 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 SLAIN1Q8ND83 568 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 TBC1D15Q8TC07 691 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 VWCEQ96DN2 955 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 HSPBAP1Q96EW2 488 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 TSSK3Q96PN8 268 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 RBM4BQ9BQ04 359 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 RBM4Q9BWF3 364 aaKnown RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 HECAQ9UBI9 543 aaPredicted RBP20.51■□□□□ 0.87
LIMS2-214ENST00000476932 DOCK6Q96HP0 2047 aa20.51■□□□□ 0.87
LIMS2-214ENST00000476932 EIF3FO00303 357 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-214ENST00000476932 IL1RNP18510 177 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 S100A3P33764 101 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 BEND7Q8N7W2 519 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-214ENST00000476932 ASB11Q8WXH4 323 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 TESCQ96BS2 214 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 FAM120BQ96EK7 910 aaKnown RBP20.5■□□□□ 0.87
LIMS2-214ENST00000476932 ZNF558Q96NG5 402 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 GPRC5BQ9NZH0 403 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 TMEFF2Q9UIK5 374 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-214ENST00000476932 NPIPB8E9PQR5 432 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 NUAK1O60285 661 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 C1QCP02747 245 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 URODP06132 367 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 PRPS2P11908 318 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 SLC7A9P82251 487 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 EPS8Q12929 822 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 MYBPC3Q14896 1274 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 MEP1AQ16819 746 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 GTF2IRD2BQ6EKJ0 949 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 C22orf39Q6P5X5 142 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 USP45Q70EL2 814 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 GTF2IRD2Q86UP8 949 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 L3MBTL4Q8NA19 623 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 OR5K1Q8NHB7 308 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 FNDC8Q8TC99 324 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 PYCR2Q96C36 320 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 ASIC4Q96FT7 647 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 APIPQ96GX9 242 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 LHPPQ9H008 270 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 ADNPQ9H2P0 1102 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 SUV39H2Q9H5I1 410 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 VNN3Q9NY84 501 aa20.5■□□□□ 0.87
LIMS2-214ENST00000476932 PLXNA2O75051 1894 aa20.49■□□□□ 0.87
LIMS2-214ENST00000476932 C16orf96A6NNT2 1141 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms