RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ADORA2A-AS1P86434 159 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 SRSF11Q05519 484 aaKnown RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 MSLNQ13421 630 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 MESDQ14696 234 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 NR1I3Q14994 352 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 CDSNQ15517 529 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF449Q6P9G9 518 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 H2AFVQ71UI9 128 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 BZW1Q7L1Q6 419 aaKnown RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 PID1Q7Z2X4 250 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 SNX20Q7Z614 316 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 CDH24Q86UP0 819 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 MCATQ8IVS2 390 aaKnown RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 OR13C4Q8NGS5 318 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 DENND1AQ8TEH3 1009 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 PSMF1Q92530 271 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 HAS2Q92819 552 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 RNF25Q96BH1 459 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-213ENST00000476777 PACSIN1Q9BY11 444 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 VPS37BQ9H9H4 285 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF160Q9HCG1 818 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 CUTCQ9NTM9 273 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 SEC14L3Q9UDX4 400 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 SH3BGRL2Q9UJC5 107 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 ASF1AQ9Y294 204 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 KLHL20Q9Y2M5 609 aa10.89□□□□□ -0.67
BRCA1-213ENST00000476777 KRT1P04264 644 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 ACPPP15309 386 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 ITGALP20701 1170 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 MAGP20916 626 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 MCM3P25205 808 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 OR1D4P47884 311 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 CDKN1CP49918 316 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF140P52738 457 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-213ENST00000476777 FANCCQ00597 558 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 KIR2DS3Q14952 304 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 YOD1Q5VVQ6 348 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-213ENST00000476777 ATG9BQ674R7 924 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 MFSD7Q6UXD7 560 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 RANBP10Q6VN20 620 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 KBTBD2Q8IY47 623 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 TBC1D21Q8IYX1 336 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 DTWD1Q8N5C7 304 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 CLDN19Q8N6F1 224 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 OR5K2Q8NHB8 316 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 DNAJB8Q8NHS0 232 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 BRIX1Q8TDN6 353 aaKnown RBP10.88□□□□□ -0.67
BRCA1-213ENST00000476777 CTNNBL1Q8WYA6 563 aaPredicted RBP10.88□□□□□ -0.67
BRCA1-213ENST00000476777 C8orf44Q96CB5 159 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 C14orf79Q96F83 325 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 VAT1Q99536 393 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 GORASP1Q9BQQ3 440 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 FICDQ9BVA6 458 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 ENAMQ9NRM1 1142 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 ZDHHC3Q9NYG2 299 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 PTGFRNQ9P2B2 879 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 POLG2Q9UHN1 485 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 PLAGL1Q9UM63 463 aa10.88□□□□□ -0.67
BRCA1-213ENST00000476777 TDRKHQ9Y2W6 561 aaKnown RBP10.88□□□□□ -0.67
BRCA1-213ENST00000476777 TRBV5-4A0A0C4DH59 114 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 ISM1B1AKI9 464 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CCL22O00626 93 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CST8O60676 142 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 WISP2O76076 250 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 F10P00742 488 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CRYABP02511 175 aaKnown RBP10.87□□□□□ -0.67
BRCA1-213ENST00000476777 GSTM1P09488 218 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 PRR35P0CG20 571 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 ACRV1P26436 265 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 ADRA1AP35348 466 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CDKN2BP42772 138 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CARSP49589 748 aaKnown RBP10.87□□□□□ -0.67
BRCA1-213ENST00000476777 ZBED6P86452 979 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 GSTM4Q03013 218 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 KLC1Q07866 573 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 OLIG2Q13516 323 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 TAZQ16635 292 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 GPR33Q49SQ1 333 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 LRRC38Q5VT99 294 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 MICALCLQ6ZW33 695 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 NLRP9Q7RTR0 991 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 METTL27Q8N6F8 245 aaPredicted RBP10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CCDC110Q8TBZ0 833 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 ADAMTS18Q8TE60 1221 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 MTFMTQ96DP5 389 aaKnown RBP10.87□□□□□ -0.67
BRCA1-213ENST00000476777 ZNF285Q96NJ3 590 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 APOL2Q9BQE5 337 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 CRB3Q9BUF7 120 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 RSPH14Q9UHP6 348 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 MAU2Q9Y6X3 613 aa10.87□□□□□ -0.67
BRCA1-213ENST00000476777 SCN2AQ99250 2005 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 FITM1A5D6W6 292 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 BHMG1C9JSJ3 638 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-213ENST00000476777 MAP2K7O14733 419 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 LIN7AO14910 233 aaPredicted RBP10.86□□□□□ -0.67
BRCA1-213ENST00000476777 SLC19A2O60779 497 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 RASAL1O95294 804 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CLDN14O95500 239 aa10.86□□□□□ -0.67
BRCA1-213ENST00000476777 CRTAMO95727 393 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms