RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 ABCC13Q9NSE7 274 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 DNMT3LQ9UJW3 386 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PCTPQ9UKL6 214 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 INTS6Q9UL03 887 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 ANGPTL3Q9Y5C1 460 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 C17orf102A2RUQ5 167 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 IFRD1O00458 451 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 E2F3O00716 465 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CPNE3O75131 537 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 ECI2O75521 394 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MOCS2O96007 188 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 POMCP01189 267 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 IGLV3-27P01718 113 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 FTH1P02794 183 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MYL3P08590 195 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 EPHA2P29317 976 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MTHFRP42898 656 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ALDH3A2P51648 485 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 STC1P52823 247 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MTPNP58546 118 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MRPS6P82932 125 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 SP140Q13342 867 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 RAPSNQ13702 412 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 C18orf21Q32NC0 220 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 ZC3H12BQ5HYM0 836 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 CTSL3PQ5NE16 218 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 TIGD7Q6NT04 549 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 PAQR3Q6TCH7 311 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 SPESP1Q6UW49 350 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 JAZF1Q86VZ6 243 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 IFNL1Q8IU54 200 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 SLC44A2Q8IWA5 706 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 MIER2Q8N344 545 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 DCBLD1Q8N8Z6 715 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CDC26Q8NHZ8 85 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 FBXO30Q8TB52 745 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 GTF3C2Q8WUA4 911 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 PROX1Q92786 737 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PABPC5Q96DU9 382 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 CATSPERBQ9H7T0 1116 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 SP140LQ9H930 580 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 GMIPQ9P107 970 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 NDUFAF1Q9Y375 327 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 DRGXA6NNA5 263 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PRMT5O14744 637 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 GPR39O43194 453 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MLYCDO95822 493 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MT-ND2P03891 347 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CYBBP04839 570 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PAMP19021 973 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 GRK5P34947 590 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ISL1P61371 349 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ALDH6A1Q02252 535 aaKnown RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 FOXM1Q08050 763 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 GALNT3Q14435 633 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 FBXL22Q6P050 247 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 NRARPQ7Z6K4 114 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PLEKHH3Q7Z736 793 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 LURAP1LQ8IV03 231 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 MSRB3Q8IXL7 192 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 UBE2J2Q8N2K1 259 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 TMEM199Q8N511 208 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 DTWD1Q8N5C7 304 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 LSMEM1Q8N8F7 131 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CHAC2Q8WUX2 184 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 KIAA1191Q96A73 305 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 ESAMQ96AP7 390 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 CPA4Q9UI42 421 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.2□□□□□ -1.1
VAPB-205ENST00000476395 TLR6Q9Y2C9 796 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 PCDHGA10Q9Y5H3 936 aa8.2□□□□□ -1.1
VAPB-205ENST00000476395 DNMT3AQ9Y6K1 912 aaPredicted RBP8.2□□□□□ -1.1
VAPB-205ENST00000476395 A0A0C4DFX4 3053 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 CCDC154A6NI56 674 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 RTCAO00442 366 aaKnown RBP8.19□□□□□ -1.1
VAPB-205ENST00000476395 CD3EAPO15446 510 aaKnown RBP8.19□□□□□ -1.1
VAPB-205ENST00000476395 HS6ST1O60243 411 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 KERAO60938 352 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 C1QCP02747 245 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 C7P10643 843 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 ACVR2AP27037 513 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 CD83Q01151 205 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 IL5RAQ01344 420 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 MVKQ03426 396 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 EMX2Q04743 252 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 BNIP2Q12982 314 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 NFYCQ13952 458 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 TBRG1Q3YBR2 411 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 NLRP8Q86W28 1048 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 PLD3Q8IV08 490 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 PIANPQ8IYJ0 282 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 PIK3C3Q8NEB9 887 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 RORBQ92753 470 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 HDAC2Q92769 488 aaKnown RBP8.19□□□□□ -1.1
VAPB-205ENST00000476395 RNF34Q969K3 372 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 TRIM54Q9BYV2 358 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 CRISPLD1Q9H336 500 aa8.19□□□□□ -1.1
VAPB-205ENST00000476395 TFB2MQ9H5Q4 396 aaKnown RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms