RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 CHMP2AO43633 222 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 SNX3O60493 162 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A9O60656 530 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 KRT36O76013 467 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 GYPCP04921 128 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 CHRNGP07510 517 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A6P19224 532 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A1P22309 533 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A4P22310 534 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 CCR7P32248 378 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A3P35503 534 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A5P35504 534 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 HPCAL1P37235 193 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 PIK3CBP42338 1070 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 NSFP46459 744 aaKnown RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 KCNJ1P48048 391 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 CCT3P49368 545 aaKnown RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 FSTL1Q12841 308 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 TOP3AQ13472 1001 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 NTRK3Q16288 839 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 TSTQ16762 297 aaKnown RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 RSBN1LQ6PCB5 846 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 SCIMPQ6UWF3 145 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UNQ9370/PRO34162Q6UXP9 181 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 ERN2Q76MJ5 926 aaKnown RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 OTOP1Q7RTM1 612 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 TGIF2LXQ8IUE1 241 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 TMEM104Q8NE00 496 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 OR10A7Q8NGE5 316 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 OR5D18Q8NGL1 313 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 ADAMTS14Q8WXS8 1223 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 KIAA1143Q96AT1 154 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 ELMO2Q96JJ3 720 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 MYL10Q9BUA6 226 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 ANGPTL4Q9BY76 406 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 POLR3FQ9H1D9 316 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 SAV1Q9H4B6 383 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 LDAHQ9H6V9 325 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 NANOGQ9H9S0 305 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A7Q9HAW7 530 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A10Q9HAW8 530 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 UGT1A8Q9HAW9 530 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 DCP1AQ9NPI6 582 aaPredicted RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 PPANQ9NQ55 473 aaKnown RBP4.77□□□□□ -1.65
NPHP3-206ENST00000474871 ZNF212Q9UDV6 495 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 ADAMTS6Q9UKP5 1117 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 SARDHQ9UL12 918 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 PLA2G4CQ9UP65 541 aa4.77□□□□□ -1.65
NPHP3-206ENST00000474871 CCDC160A6NGH7 325 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 BTBD18B2RXH4 712 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 GGPS1O95749 300 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 PDGFBP01127 241 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 MMP3P08254 477 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 FAM153BP0C7A2 387 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 TCF4P15884 667 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SPNP16150 400 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SRMP19623 302 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 TYMPP19971 482 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 MCM7P33993 719 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 CCR4P51679 360 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 LUMP51884 338 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 RAP1GDS1P52306 607 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 GABPAQ06546 454 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 BAATQ14032 418 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 GAB4Q2WGN9 574 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 FAM153CQ494X1 144 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SLC36A3Q495N2 470 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 RBMS3Q6XE24 437 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 ZNF438Q7Z4V0 828 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 GPR149Q86SP6 731 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 AMZ2Q86W34 360 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 TC2NQ8N9U0 490 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SETD9Q8NE22 299 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SNX29Q8TEQ0 813 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 MRGPRFQ96AM1 343 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 ZFRQ96KR1 1074 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 ZSCAN10Q96SZ4 725 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 KRT12Q99456 494 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 WDR77Q9BQA1 342 aaPredicted RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 MRPS26Q9BYN8 205 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 CELF4Q9BZC1 486 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 TBC1D13Q9NVG8 400 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 B4GALT6Q9UBX8 382 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SERPINB13Q9UIV8 391 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 TRMT6Q9UJA5 497 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 UTS2RQ9UKP6 389 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 RPH3ALQ9UNE2 315 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 FAM234BA2RU67 622 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 OR2AG2A6NM03 316 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 MCIDASD6RGH6 385 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 ANGPT2O15123 496 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 CD3EAPO15446 510 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 CYTIPO60759 359 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 DNAJB6O75190 326 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 LINC00614P0C842 121 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 JUPP14923 745 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 SPI1P17947 270 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 RPL35P42766 123 aaKnown RBP4.76□□□□□ -1.65
NPHP3-206ENST00000474871 AFMP43652 599 aa4.76□□□□□ -1.65
NPHP3-206ENST00000474871 MAP2K6P52564 334 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms