RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 FBXO38Q6PIJ6 1188 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 UBE2R2Q712K3 238 aaPredicted RBP13.3□□□□□ -0.28
USF1-205ENST00000473969 PIWIL4Q7Z3Z4 852 aaKnown RBP13.3□□□□□ -0.28
USF1-205ENST00000473969 TAX1BP1Q86VP1 789 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 PPP1R3BQ86XI6 285 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 D2HGDHQ8N465 521 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
USF1-205ENST00000473969 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 EEF1AKMT1Q8WVE0 214 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 ASB11Q8WXH4 323 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 LINGO1Q96FE5 620 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 TSPAN17Q96FV3 270 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 HIST1H2AHQ96KK5 128 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 HIST1H2AJQ99878 128 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 CTRCQ99895 268 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 H2AFJQ9BTM1 129 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 INTS7Q9NVH2 962 aaKnown RBP13.3□□□□□ -0.28
USF1-205ENST00000473969 FOXJ2Q9P0K8 574 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 ZFHX4Q86UP3 3567 aa13.3□□□□□ -0.28
USF1-205ENST00000473969 CHD8Q9HCK8 2581 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 ARHGEF33A8MVX0 844 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 CXorf49A8MYA2 514 aaPredicted RBP13.29□□□□□ -0.28
USF1-205ENST00000473969 ESPNB1AK53 854 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 SLC16A5O15375 505 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 KLK10O43240 276 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 ZNF500O60304 480 aaPredicted RBP13.29□□□□□ -0.28
USF1-205ENST00000473969 FKBP9O95302 570 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 EBLN1P0CF75 366 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 TPBGLP0DKB5 382 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 LIPCP11150 499 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 FDXRP22570 491 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 OAS2P29728 719 aaKnown RBP13.29□□□□□ -0.28
USF1-205ENST00000473969 ATP1A2P50993 1020 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 POU4F1Q01851 419 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 SP140Q13342 867 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 USP10Q14694 798 aaKnown RBP13.29□□□□□ -0.28
USF1-205ENST00000473969 KCNAB1Q14722 419 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 ARHGAP19Q14CB8 494 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 SLC5A12Q1EHB4 618 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 KBTBD12Q3ZCT8 623 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 TEX35Q5T0J7 233 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 CYHR1Q6ZMK1 362 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 ZFAND4Q86XD8 727 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 SYTL1Q8IYJ3 562 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 OR8K5Q8NH50 307 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 TCTN2Q96GX1 697 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 PPM1MQ96MI6 270 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 TRAPPC9Q96Q05 1148 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 OR2A14Q96R47 310 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 CYTH2Q99418 400 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 NRTNQ99748 197 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 L2HGDHQ9H9P8 463 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 APMAPQ9HDC9 416 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 SMYD2Q9NRG4 433 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 FGF21Q9NSA1 209 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 SIDT1Q9NXL6 827 aaKnown RBP13.29□□□□□ -0.28
USF1-205ENST00000473969 SPHK1Q9NYA1 384 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 ACSL6Q9UKU0 697 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 NFU1Q9UMS0 254 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 IKBKGQ9Y6K9 419 aa13.29□□□□□ -0.28
USF1-205ENST00000473969 A0A087WV48 116 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 GFYI3L273 518 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 MYO1CO00159 1063 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 PIAS1O75925 651 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 FOLR1P15328 257 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 ST6GAL1P15907 406 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 STMN1P16949 149 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 RPA3P35244 121 aaPredicted RBP13.28□□□□□ -0.28
USF1-205ENST00000473969 TUBB4BP68371 445 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 GRB7Q14451 532 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 NAA25Q14CX7 972 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 UAP1Q16222 522 aaPredicted RBP13.28□□□□□ -0.28
USF1-205ENST00000473969 CCSMST1Q4G0I0 132 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 TRIM73Q86UV7 250 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 RELL1Q8IUW5 271 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 C19orf47Q8N9M1 422 aaKnown RBP13.28□□□□□ -0.28
USF1-205ENST00000473969 LINC01555Q8NAE3 123 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 FBXO15Q8NCQ5 510 aaPredicted RBP13.28□□□□□ -0.28
USF1-205ENST00000473969 SMPDL3AQ92484 453 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 CCDC138Q96M89 665 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 PKP4Q99569 1192 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 RBBP8Q99708 897 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 OLFM1Q99784 485 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 PITPNM3Q9BZ71 974 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 ULBP3Q9BZM4 244 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 SLC7A5P2Q9GIP4 190 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 KLHL25Q9H0H3 589 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 PARVBQ9HBI1 364 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 POPDC3Q9HBV1 291 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 GPAMQ9HCL2 828 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 NINJ2Q9NZG7 142 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 SERTAD3Q9UJW9 196 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 BTRCQ9Y297 605 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 MTO1Q9Y2Z2 717 aaKnown RBP13.28□□□□□ -0.28
USF1-205ENST00000473969 SPEGQ15772 3267 aa13.28□□□□□ -0.28
USF1-205ENST00000473969 AKAP13Q12802 2813 aa13.27□□□□□ -0.28
USF1-205ENST00000473969 CCNDBP1O95273 360 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 ACSL3O95573 720 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 FGF5P12034 268 aa13.27□□□□□ -0.29
USF1-205ENST00000473969 PVRP15151 417 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms