RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 OGFRQ9NZT2 677 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 ZFATQ9P243 1243 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 ZNF624Q9P2J8 865 aaPredicted RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 PDP2Q9P2J9 529 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.9□□□□□ -0.987e-44■■■■■ 137.4
SMC4-213ENST00000472282 KLHL3Q9UH77 587 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 ZNF232Q9UNY5 417 aa8.9□□□□□ -0.98
SMC4-213ENST00000472282 V9GYY5 206 aaPredicted RBP8.9□□□□□ -0.98
SMC4-213ENST00000472282 KIR2DS5A0A0G2JLQ3 304 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 A0A0G2JNG1 304 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 C17orf113A0A1B0GUU1 675 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 TCRBV9S1A1TA0A576 114 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 KLHL33A6NCF5 533 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 OR5K4A6NMS3 321 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 OR52A4PA6NMU1 304 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 EFCAB7A8K855 629 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 KIR2DS3K7RE56 304 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 LIN7AO14910 233 aaPredicted RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 DUX1O43812 170 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 PIAS1O75925 651 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 HAUS5O94927 633 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 ESR1P03372 595 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 GSTA2P09210 222 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 GSTM1P09488 218 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 MYBL2P10244 700 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 PKMP14618 531 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 SLC2A4P14672 509 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 GABRB3P28472 473 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 PDHA2P29803 388 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 HALP42357 657 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 LEPRP48357 1165 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 PPM1FP49593 454 aaPredicted RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 ADARP55265 1226 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 GFERP55789 205 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 UBE2IP63279 158 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 GPLD1P80108 840 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 GSTM4Q03013 218 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 KIR2DS5Q14953 304 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 CLCA4Q14CN2 919 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 KYNUQ16719 465 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 SYTL3Q4VX76 610 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 AGAP9Q5VTM2 703 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 METRNLQ641Q3 311 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 DUS1LQ6P1R4 473 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 ZNF549Q6P9A3 640 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 ABRAXAS1Q6UWZ7 409 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 KIAA0408Q6ZU52 694 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 C3orf62Q6ZUJ4 267 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 ARHGAP22Q7Z5H3 698 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 SYT9Q86SS6 491 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 FAM129CQ86XR2 697 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 TRIM48Q8IWZ4 208 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 AGBL5Q8NDL9 886 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 OR10G6Q8NH81 332 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 NCSTNQ92542 709 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 FAM136AQ96C01 138 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 AHCYL2Q96HN2 611 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 PANX3Q96QZ0 392 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 SPRY4Q9C004 299 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 ZMYND15Q9H091 742 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 TSPYL1Q9H0U9 437 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 CCDC68Q9H2F9 335 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 LRRC4CQ9HCJ2 640 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 SMYD2Q9NRG4 433 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 ZNF358Q9NW07 568 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 SLC39A1Q9NY26 324 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 MOCS1Q9NZB8 636 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 CPNE7Q9UBL6 633 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 WDR37Q9Y2I8 494 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 PCDHGA3Q9Y5H0 932 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 PSAT1Q9Y617 370 aa8.89□□□□□ -0.99
SMC4-213ENST00000472282 CFAP20Q9Y6A4 193 aaKnown RBP8.89□□□□□ -0.99
SMC4-213ENST00000472282 ATMQ13315 3056 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 KRTAP4-8A0A0G2JLE6 195 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 SLC5A10A0PJK1 596 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 FAM159BA6NKW6 160 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 CXorf49A8MYA2 514 aaPredicted RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 E5RI56 91 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 H3BMM5 538 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 SPAG6O75602 509 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 ACSL3O95573 720 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 C1QAP02745 245 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 AHSGP02765 367 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 APOA4P06727 396 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 FAM153BP0C7A2 387 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 SLC35G4P0C7Q5 338 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 LIFP15018 202 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 TNFRSF8P28908 595 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 CCR7P32248 378 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 STX2P32856 288 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 CSTF2P33240 577 aaKnown RBP eCLIP8.88□□□□□ -0.99
SMC4-213ENST00000472282 CD151P48509 253 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 DOC2BQ14184 412 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 EFTUD2Q15029 972 aaKnown RBP eCLIP8.88□□□□□ -0.997e-8■■□□□ 12.6
SMC4-213ENST00000472282 TMED2Q15363 201 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 KBTBD12Q3ZCT8 623 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 FAM153CQ494X1 144 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 RBM20Q5T481 1227 aaKnown RBP8.88□□□□□ -0.99
SMC4-213ENST00000472282 ZNF449Q6P9G9 518 aa8.88□□□□□ -0.99
SMC4-213ENST00000472282 WDR74Q6RFH5 385 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms