RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 LRIG2O94898 1065 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 SLC25A14O95258 325 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-206ENST00000471968 GPR89BP0CG08 455 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TXLNAP40222 546 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 STC1P52823 247 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 ARSFP54793 590 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 WNT3P56703 355 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 AP1S1P61966 158 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 IHHQ14623 411 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 BTBD16Q32M84 506 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 ACAD10Q6JQN1 1059 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TTI2Q6NXR4 508 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 POMZP3Q6PJE2 187 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 OLFML1Q6UWY5 402 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 Q6ZPA2 131 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 CCDC73Q6ZRK6 1079 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 DNM1P46Q6ZS02 220 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 MAATS1Q7Z4T9 603 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TRIM73Q86UV7 250 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 HOOK3Q86VS8 718 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC3-206ENST00000471968 BANPQ8N9N5 519 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TNIP2Q8NFZ5 429 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 GPT2Q8TD30 523 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 FAM216AQ8WUB2 273 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TBC1D31Q96DN5 1066 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 ART5Q96L15 291 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 IMMP1LQ96LU5 166 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 WDR24Q96S15 920 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 CPXM1Q96SM3 734 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 NRTNQ99748 197 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 RHNO1Q9BSD3 238 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 EPB41L4BQ9H329 900 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 SRMSQ9H3Y6 488 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 KIR3DX1Q9H7L2 352 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 KCNK13Q9HB14 408 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TRIM39Q9HCM9 518 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 CUTCQ9NTM9 273 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 MED29Q9NX70 200 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.18□□□□□ -1.42
HDAC3-206ENST00000471968 ZNF282Q9UDV7 671 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-206ENST00000471968 NDRG3Q9UGV2 375 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 TESMINQ9Y4I5 508 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 LIPGQ9Y5X9 500 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 RAI1Q7Z5J4 1906 aaPredicted RBP6.18□□□□□ -1.42
HDAC3-206ENST00000471968 MALRD1Q5VYJ5 2156 aa6.18□□□□□ -1.42
HDAC3-206ENST00000471968 HEATR5AQ86XA9 2040 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 FAM234BA2RU67 622 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 FAM166BA8MTA8 275 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 WASH4PA8MWX3 477 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 KLRC4O43908 158 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 PEX1O43933 1283 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 TMCC2O75069 709 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 SOCS5O75159 536 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 RGS9O75916 674 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 SEC24DO94855 1032 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 AMPD1P23109 780 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 SRP14P37108 136 aaKnown RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 GCGRP47871 477 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 GPR85P60893 370 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 RPS4XP62701 263 aaKnown RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 NSUN2Q08J23 767 aaKnown RBP eCLIP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 TRAF2Q12933 501 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 E2F4Q16254 413 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 CAMK4Q16566 473 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 OCLNQ16625 522 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 PARP15Q460N3 678 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 CCDC14Q49A88 953 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 VWA3BQ502W6 1294 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 HENMT1Q5T8I9 393 aaKnown RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 WLSQ5T9L3 541 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 H3F3CQ6NXT2 135 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 C11orf57Q6ZUT1 292 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 TRAPPC5Q8IUR0 188 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 DENND1AQ8TEH3 1009 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 MRPL24Q96A35 216 aaKnown RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 SCYL1Q96KG9 808 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 CAPZA3Q96KX2 299 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 C12orf66Q96MD2 445 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 INSM2Q96T92 566 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 TUBB6Q9BUF5 446 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 RBM24Q9BX46 236 aaKnown RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 MAGEB5Q9BZ81 275 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 RASSF4Q9H2L5 321 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 FAM83DQ9H4H8 585 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 FN3KRPQ9HA64 309 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 METTL14Q9HCE5 456 aaKnown RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 GALNT8Q9NY28 637 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 LAMP3Q9UQV4 416 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 KLF13Q9Y2Y9 288 aaPredicted RBP6.17□□□□□ -1.42
HDAC3-206ENST00000471968 NFS1Q9Y697 457 aa6.17□□□□□ -1.42
HDAC3-206ENST00000471968 LOC102723996A0A087X1L8 192 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 A0A0A6YYJ9 748 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 IGHV3-20A0A0C4DH32 117 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 LOC100289279A0A1B0GTE1 492 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 C2orf74A8MZ97 194 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 SLCO1B7G3V0H7 640 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 MATN3O15232 486 aa6.16□□□□□ -1.42
HDAC3-206ENST00000471968 PRAMEF11O60813 436 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms