RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 TMEM74Q96NL1 305 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 IFT27Q9BW83 186 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 NOD2Q9HC29 1040 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 CLEC4AQ9UMR7 237 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 IRAK3Q9Y616 596 aa8.4□□□□□ -1.06
CD47-204ENST00000471694 UBE2QL1A1L167 161 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 BANF1O75531 89 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 LEFTY1O75610 366 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 C4BPAP04003 597 aaKnown RBP8.4□□□□□ -1.07
CD47-204ENST00000471694 HEXAP06865 529 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 CREB1P16220 341 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 ZNF16P17020 682 aaPredicted RBP8.4□□□□□ -1.07
CD47-204ENST00000471694 CSNK2A2P19784 350 aaPredicted RBP8.4□□□□□ -1.07
CD47-204ENST00000471694 TGFBR2P37173 567 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 TNFRSF4P43489 277 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 CCL11P51671 97 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 CDH15P55291 814 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 ID2Q02363 134 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 ACY1Q03154 408 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 LIPMQ5VYY2 423 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 TTLL10Q6ZVT0 673 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 SLC13A3Q8WWT9 602 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 TOE1Q96GM8 510 aaKnown RBP8.4□□□□□ -1.07
CD47-204ENST00000471694 SEMA6AQ9H2E6 1030 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 ASB6Q9NWX5 421 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 TTLL8A6PVC2 850 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 PITPNM1O00562 1244 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 LRCH4O75427 683 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 SLC22A3O75751 556 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 CST1P01037 141 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 KIAA1161Q6NSJ0 714 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 IQCHQ86VS3 1027 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 LRRC34Q8IZ02 419 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 C8orf48Q96LL4 319 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 ELAC1Q9H777 363 aaKnown RBP8.4□□□□□ -1.07
CD47-204ENST00000471694 HEBP1Q9NRV9 189 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 PCDHGA11Q9Y5H2 935 aa8.4□□□□□ -1.07
CD47-204ENST00000471694 LOC100506127A0A0U1RQW1 187 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 IRGMA1A4Y4 181 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 YJEFN3A6XGL0 299 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 E7ENQ6 273 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CLDN7O95471 211 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 MTHFD1P11586 935 aaKnown RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 IDO1P14902 403 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CFL1P23528 166 aaKnown RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 KIR3DL1P43629 444 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 WDR5P61964 334 aaKnown RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 EVX2Q03828 476 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CDKN3Q16667 212 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 DCAF12Q5T6F0 453 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 C11orf65Q8NCR3 313 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 GSTCDQ8NEC7 633 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 OR5L2Q8NGL0 311 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 GIPC3Q8TF64 312 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 SMPDL3AQ92484 453 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 TBC1D17Q9HA65 648 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 SMURF2Q9HAU4 748 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CAPN6Q9Y6Q1 641 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 BTN3A3O00478 584 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 PAPSS2O95340 614 aaPredicted RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 CNEP1R1Q8N9A8 125 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 OR6K6Q8NGW6 343 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 SLC38A4Q969I6 547 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CMTM7Q96FZ5 175 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 PSKH2Q96QS6 385 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CCT8L2Q96SF2 557 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 C9orf16Q9BUW7 83 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 SNX15Q9NRS6 342 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 PPP1R14DQ9NXH3 145 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 RCOR3Q9P2K3 495 aaPredicted RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 UTS2RQ9UKP6 389 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 MYADML2A6NDP7 307 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 SNPHO15079 494 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 BRINP1O60477 761 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 RLN1P04808 185 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 SRPRAP08240 638 aaKnown RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 EFNA1P20827 205 aaPredicted RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 CD6P30203 668 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 DGKQP52824 942 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 FCHO2Q0JRZ9 810 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 MYBPHQ13203 477 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 RNASE12Q5GAN4 147 aaKnown RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 CPNE9Q8IYJ1 553 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 EDAQ92838 391 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 TCAF1Q9Y4C2 921 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 NEURL4Q96JN8 1562 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 DUXAA6NLW8 204 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 DLX3O60479 287 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 ALDOAP04075 364 aaKnown RBP8.39□□□□□ -1.07
CD47-204ENST00000471694 ITGA2BP08514 1039 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 TCN2P20062 427 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 CCR10P46092 362 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 VBP1P61758 197 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 NTHL1P78549 312 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 FMO1Q01740 532 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 TDGQ13569 410 aa8.39□□□□□ -1.07
CD47-204ENST00000471694 GBX1Q14549 363 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms