RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 SARM1Q6SZW1 724 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 RSRC2Q7L4I2 434 aaKnown RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 MAATS1Q7Z4T9 603 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 DZIP1Q86YF9 867 aaKnown RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 CCDC89Q8N998 374 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 SMPDL3BQ92485 455 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 C7orf26Q96N11 449 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 WDFY2Q96P53 400 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 NUDCD1Q96RS6 583 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 SLX1AQ9BQ83 275 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 UNC45AQ9H3U1 944 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 DBNDD1Q9H9R9 158 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 R3HDM2Q9Y2K5 976 aaKnown RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 RABGAP1Q9Y3P9 1069 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 DOCK2Q92608 1830 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 RPAP1Q9BWH6 1393 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-202ENST00000471307 CCDC171Q6TFL3 1326 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 MYO3BQ8WXR4 1341 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 YDJCA8MPS7 323 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 TIMM44O43615 452 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 BAG3O95817 575 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 HSPD1P10809 573 aaKnown RBP5.05□□□□□ -1.6
CCDC39-202ENST00000471307 ATP1A3P13637 1013 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 GNAZP19086 355 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 PTMSP20962 102 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 GAGE2BQ13066 116 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 KCTD2Q14681 263 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 ALX1Q15699 326 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 GAGE2EQ4V326 116 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 ACSM2BQ68CK6 577 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 GAGE2AQ6NT46 116 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 TMTC3Q6ZXV5 915 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 MYPOPQ86VE0 399 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-202ENST00000471307 CERS5Q8N5B7 392 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 PRMT6Q96LA8 375 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-202ENST00000471307 LSG1Q9H089 658 aaKnown RBP5.05□□□□□ -1.6
CCDC39-202ENST00000471307 SLC38A7Q9NVC3 462 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 GAGE2DQ9UEU5 116 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 CTNNA3Q9UI47 895 aa5.05□□□□□ -1.6
CCDC39-202ENST00000471307 COL1A1P02452 1464 aaPredicted RBP5.05□□□□□ -1.6
CCDC39-202ENST00000471307 SCN9AQ15858 1988 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 MYH2Q9UKX2 1941 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 GPR75-ASB3A0A0A6YYF3 556 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 NR5A2O00482 541 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 GPAA1O43292 621 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF500O60304 480 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-202ENST00000471307 PLA2G4BP0C869 781 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 SELLP14151 372 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 HRH2P25021 359 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 RPS12P25398 132 aaKnown RBP5.04□□□□□ -1.6
CCDC39-202ENST00000471307 HSPA4P34932 840 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 KRT9P35527 623 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 TAF6P49848 677 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 GPR143P51810 404 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 CXCL9Q07325 125 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 ITGA9Q13797 1035 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 NECTIN1Q15223 517 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 NDUFAF5Q5TEU4 345 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 CPLX4Q7Z7G2 160 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF589Q86UQ0 364 aaPredicted RBP5.04□□□□□ -1.6
CCDC39-202ENST00000471307 POMGNT1Q8WZA1 660 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 TEKT1Q969V4 418 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 MOAP1Q96BY2 351 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 C1orf74Q96LT6 269 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 GFI1Q99684 422 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 RIOK1Q9BRS2 568 aaKnown RBP5.04□□□□□ -1.6
CCDC39-202ENST00000471307 CRNKL1Q9BZJ0 848 aaKnown RBP5.04□□□□□ -1.6
CCDC39-202ENST00000471307 NACAP1Q9BZK3 213 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 RAD21L1Q9H4I0 556 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 PSME4Q14997 1843 aa5.04□□□□□ -1.6
CCDC39-202ENST00000471307 GOLGB1Q14789 3259 aaKnown RBP5.03□□□□□ -1.6
CCDC39-202ENST00000471307 DICER1Q9UPY3 1922 aaKnown RBP5.03□□□□□ -1.6
CCDC39-202ENST00000471307 MROH7-TTC4A0A0A0MT08 1334 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 GAKO14976 1311 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 ZMYM6O95789 1325 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 SBF1O95248 1867 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 LIPT2A6NK58 231 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 ZBTB43O43298 467 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF217O75362 1048 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 GPC4O75487 556 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 MBD4O95243 580 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 KRT19P08727 400 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 PSMA5P28066 241 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 BTDP43251 543 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 MMP15P51511 669 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 GALCP54803 685 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 DRG2P55039 364 aaKnown RBP5.03□□□□□ -1.6
CCDC39-202ENST00000471307 KRT32Q14532 448 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 IMMTQ16891 758 aaKnown RBP5.03□□□□□ -1.6
CCDC39-202ENST00000471307 ZDHHC20Q5W0Z9 365 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF534Q76KX8 674 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 ADGRA1Q86SQ6 560 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 PTOV1Q86YD1 416 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 GPALPP1Q8IXQ4 340 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 SNRNP27Q8WVK2 155 aaKnown RBP5.03□□□□□ -1.6
CCDC39-202ENST00000471307 NCAPGQ9BPX3 1015 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 SLC26A6Q9BXS9 759 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 SRCAPQ6ZRS2 3230 aa5.03□□□□□ -1.6
CCDC39-202ENST00000471307 OR2M5A3KFT3 312 aa5.02□□□□□ -1.61
CCDC39-202ENST00000471307 OGG1O15527 345 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms