RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 CLIP3Q96DZ5 547 aa6.57□□□□□ -1.36
LDHB-206ENST00000470985 ZMYND19Q96E35 227 aaPredicted RBP6.57□□□□□ -1.36
LDHB-206ENST00000470985 BTN2A3PQ96KV6 586 aa6.57□□□□□ -1.36
LDHB-206ENST00000470985 GBP4Q96PP9 640 aa6.57□□□□□ -1.36
LDHB-206ENST00000470985 PLEKHG4BQ96PX9 1271 aa6.57□□□□□ -1.36
LDHB-206ENST00000470985 STN1Q9H668 368 aaKnown RBP6.57□□□□□ -1.36
LDHB-206ENST00000470985 TBC1D29Q9UFV1 150 aa6.57□□□□□ -1.36
LDHB-206ENST00000470985 PADI2Q9Y2J8 665 aa6.57□□□□□ -1.36
LDHB-206ENST00000470985 SPTBP11277 2137 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 C17orf113A0A1B0GUU1 675 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 KCNU1A8MYU2 1149 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 C9J4A7 227 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 NPIPA5E9PKD4 350 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 AGPSO00116 658 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 TGFB1I1O43294 461 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 TLX2O43763 284 aaPredicted RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 CD5LO43866 347 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 CLDN11O75508 207 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 MTA2O94776 668 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 P4HA1P13674 534 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 TRIM21P19474 475 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 FOLR3P41439 243 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 RGS7P49802 495 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 ARSEP51690 589 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 SESN2P58004 480 aaPredicted RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 UBE2IP63279 158 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 CD83Q01151 205 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 ACY1Q03154 408 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 CACNG1Q06432 222 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 RALGDSQ12967 914 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 OLIG2Q13516 323 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 PEX6Q13608 980 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 GRM7Q14831 915 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 STILQ15468 1287 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 LSM12Q3MHD2 195 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 IRAK1BP1Q5VVH5 260 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 TIGD7Q6NT04 549 aaPredicted RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 PNCKQ6P2M8 343 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 IYDQ6PHW0 289 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 MARK2Q7KZI7 788 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 ADGRE4PQ86SQ3 457 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 SLC9B2Q86UD5 537 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 GUF1Q8N442 669 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 RAD54LQ92698 747 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 THOC3Q96J01 351 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 LHPPQ9H008 270 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 APOBEC3GQ9HC16 384 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 CNGB3Q9NQW8 809 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 CPNE7Q9UBL6 633 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 B4GALT6Q9UBX8 382 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 CNOT8Q9UFF9 292 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 NOCTQ9UK39 431 aaKnown RBP6.56□□□□□ -1.36
LDHB-206ENST00000470985 NPIPA1Q9UND3 350 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 SLC17A4Q9Y2C5 497 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 ASB1Q9Y576 335 aa6.56□□□□□ -1.36
LDHB-206ENST00000470985 LRRIQ3A6PVS8 624 aaPredicted RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 KIAA0391O15091 583 aaKnown RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 DNAJB6O75190 326 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 H2AFYO75367 372 aaKnown RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 ZRANB2O95218 330 aaKnown RBP eCLIP6.55□□□□□ -1.36
LDHB-206ENST00000470985 PIGNO95427 931 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 ASS1P00966 412 aaKnown RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 JCHAINP01591 159 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 IVLP07476 585 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 ZNF30P17039 623 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 AMD1P17707 334 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 SLC9A1P19634 815 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 APEX1P27695 318 aaKnown RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 TOB1P50616 345 aaPredicted RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 CYP2J2P51589 502 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 CDH4P55283 916 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TUBB4BP68371 445 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 CDK3Q00526 305 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 ELP6Q0PNE2 266 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TUBB2AQ13885 445 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 FILIP1LQ4L180 1135 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 FLYWCH1Q4VC44 716 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 ZNF789Q5FWF6 425 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 CATSPEREQ5SY80 951 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 MLIPQ5VWP3 458 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 SYPL2Q5VXT5 272 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 ARHGAP17Q68EM7 881 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 LEKR1Q6ZMV7 388 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TFAP2DQ7Z6R9 452 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 SLC4A11Q8NBS3 891 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 MYRIPQ8NFW9 859 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 OR2AP1Q8NGE2 309 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 UBA3Q8TBC4 463 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 CPT1BQ92523 772 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TTC1Q99614 292 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 MESP1Q9BRJ9 268 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TRIM51Q9BSJ1 452 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TUBB2BQ9BVA1 445 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TEX101Q9BY14 249 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.55□□□□□ -1.36
LDHB-206ENST00000470985 TTYH3Q9C0H2 523 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 SEMA5BQ9P283 1151 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 PTGFRNQ9P2B2 879 aa6.55□□□□□ -1.36
LDHB-206ENST00000470985 TSPAN16Q9UKR8 245 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms