RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, human

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD3-208	ENST00000470045	DNAJC22	Q8N4W6	341 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	CFAP61	Q8NHU2	1237 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	GSDMB	Q8TAX9	411 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	HMGCLL1	Q8TB92	370 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	APOBEC4	Q8WW27	367 aa	Known RBP	13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	SEC14L1	Q92503	715 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	ANP32B	Q92688	251 aa	Known RBP	13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	RAD51AP1	Q96B01	352 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	SLC22A18	Q96BI1	424 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	IL17F	Q96PD4	163 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	SLC25A18	Q9H1K4	315 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	CHST8	Q9H2A9	424 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	ACTR5	Q9H9F9	607 aa	Predicted RBP	13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	SERTAD3	Q9UJW9	196 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	PYCARD	Q9ULZ3	195 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	RUVBL2	Q9Y230	463 aa	Known RBP	13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	POLH	Q9Y253	713 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	CRYL1	Q9Y2S2	319 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	MED16	Q9Y2X0	877 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	KCNMB2	Q9Y691	235 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	SEC16A	O15027	2179 aa		13.56	□□□□□ -0.24
COMMD3-208	ENST00000470045	ISM1	B1AKI9	464 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045		E7EQ34	232 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	FKBP9	O95302	570 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	KLK3	P07288	261 aa	Predicted RBP	13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	CAPN1	P07384	714 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	RAB40AL	P0C0E4	278 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	MAG	P20916	626 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	CCNF	P41002	786 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	SLC1A2	P43004	574 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	BDKRB1	P46663	353 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	GNG11	P61952	73 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	NFATC3	Q12968	1075 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	ERV3-1	Q14264	604 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	LONRF1	Q17RB8	773 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	DEFB109B	Q30KR1	87 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	CCSMST1	Q4G0I0	132 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	LCN10	Q6JVE6	187 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	FAM198B	Q6UWH4	519 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	SYVN1	Q86TM6	617 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	DENND6A	Q8IWF6	608 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	SYTL1	Q8IYJ3	562 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	ZBTB2	Q8N680	514 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	DENND1A	Q8TEH3	1009 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	MR1	Q95460	341 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	ENAM	Q9NRM1	1142 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	GALP	Q9UBC7	116 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	ASIC3	Q9UHC3	531 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	CIDEB	Q9UHD4	219 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	FARSA	Q9Y285	508 aa	Known RBP	13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	FAM169A	Q9Y6X4	670 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	BSN	Q9UPA5	3926 aa		13.55	□□□□□ -0.24
COMMD3-208	ENST00000470045	FANCG	O15287	622 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	ZNF749	O43361	778 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	HBQ1	P09105	142 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	PYGB	P11216	843 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	ERG	P11308	486 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	PGAM1	P18669	254 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	GCGR	P47871	477 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	CLCN7	P51798	805 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	RPS18	P62269	152 aa	Known RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	RPS15	P62841	145 aa	Known RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	CTBP1	Q13363	440 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	IL10RA	Q13651	578 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	THOC5	Q13769	683 aa	Known RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	UGT8	Q16880	541 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	DEFB110	Q30KQ9	67 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	ACSBG2	Q5FVE4	666 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	RHBDD2	Q6NTF9	364 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	ZNF549	Q6P9A3	640 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	TTC23L	Q6PF05	361 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	CNST	Q6PJW8	725 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	SYDE1	Q6ZW31	735 aa	Predicted RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	GPR135	Q8IZ08	494 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	LMNTD1	Q8N9Z9	388 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	GIMAP7	Q8NHV1	300 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	CALML6	Q8TD86	181 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	KCNJ9	Q92806	393 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	CLIP3	Q96DZ5	547 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	FOPNL	Q96NB1	174 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	NAPG	Q99747	312 aa	Predicted RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	DPH2	Q9BQC3	489 aa	Predicted RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	NLN	Q9BYT8	704 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	SPATA7	Q9P0W8	599 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	KLHL42	Q9P2K6	505 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	SLC39A10	Q9ULF5	831 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	KLK4	Q9Y5K2	254 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	MAD1L1	Q9Y6D9	718 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	AP1M2	Q9Y6Q5	423 aa		13.54	□□□□□ -0.24
COMMD3-208	ENST00000470045	PCM1	Q15154	2024 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045		A0A1W2PPV9	198 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045	CDC14C	A4D256	554 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045	KRT87P	A6NCN2	255 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045	ARHGEF33	A8MVX0	844 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045		E5RI56	91 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045	PSIP1	O75475	530 aa	Known RBP	13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045	OR2B3	O76000	313 aa		13.53	□□□□□ -0.24
COMMD3-208	ENST00000470045	CTSB	P07858	339 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms