RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 WDR24Q96S15 920 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF670Q9BS34 389 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 SYT11Q9BT88 431 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ZDHHC6Q9H6R6 413 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ATP13A3Q9H7F0 1226 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 GRPEL1Q9HAV7 217 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 VPS45Q9NRW7 570 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 FBXL12Q9NXK8 326 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 DLL3Q9NYJ7 618 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 ING1Q9UK53 422 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-208ENST00000469585 FZD4Q9ULV1 537 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 HS3ST2Q9Y278 367 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 KIAA1549LQ6ZVL6 1849 aa6.24□□□□□ -1.41
PTCD3-208ENST00000469585 COL4A2P08572 1712 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 MACROD2A1Z1Q3 448 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PRR23AA6NEV1 266 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 TTC34A8MYJ7 566 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 MIF4GDA9UHW6 222 aaKnown RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 WASH3PC4AMC7 463 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CYR61O00622 381 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 MGST3O14880 152 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 MCF2LO15068 1137 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ZSCAN12O43309 604 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DHHO43323 396 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 KDELR3O43731 214 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CNTN5O94779 1100 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 SEMA4FO95754 770 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 GSRP00390 522 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 GOT1P17174 413 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PRKCHP24723 683 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 GKP32189 559 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CHRNA3P32297 505 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 SLC8A1P32418 973 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ACTN2P35609 894 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 P2RY2P41231 377 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 GDF5P43026 501 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 STK19P49842 368 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 TPMTP51580 245 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ELP6Q0PNE2 266 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 SGCGQ13326 291 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 FHL2Q14192 279 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PTK2BQ14289 1009 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PDK1Q15118 436 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DPYSL2Q16555 572 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DUOXA1Q1HG43 343 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 SETMARQ53H47 684 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 INO80DQ53TQ3 878 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CARD16Q5EG05 197 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 FSCBQ5H9T9 825 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 KCNT1Q5JUK3 1230 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 SEL1L2Q5TEA6 688 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DAB2IPQ5VWQ8 1189 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 IL27RAQ6UWB1 636 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CLEC9AQ6UXN8 241 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DPY19L3Q6ZPD9 716 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 Q6ZWC4 215 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PEX26Q7Z412 305 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 WDR53Q7Z5U6 358 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 MRGPRGQ86SM5 289 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PRPF39Q86UA1 669 aaKnown RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 VSIG1Q86XK7 387 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 RCOR2Q8IZ40 523 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 UMODL1-AS1Q8N2C9 162 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 STK40Q8N2I9 435 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF366Q8N895 744 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 C11orf44Q8N8P7 122 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 FAM71BQ8TC56 605 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 WFDC5Q8TCV5 224 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ABHD5Q8WTS1 349 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PIGKQ92643 395 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ARHGEF2Q92974 986 aaKnown RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 RAB7BQ96AH8 199 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ERLEC1Q96DZ1 483 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 WDYHV1Q96HA8 205 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 FEM1CQ96JP0 617 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF599Q96NL3 588 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PRR25Q96S07 402 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ACOX2Q99424 681 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 CHP1Q99653 195 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 GPR174Q9BXC1 333 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 BRD8Q9H0E9 1235 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 RSPH9Q9H1X1 276 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 TMEM245Q9H330 911 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PABPC3Q9H361 631 aaKnown RBP6.23□□□□□ -1.41
PTCD3-208ENST00000469585 PRSS16Q9NQE7 514 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 ITM2CQ9NQX7 267 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DUSP22Q9NRW4 184 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 GPATCH2LQ9NWQ4 482 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 STEAP1Q9UHE8 339 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 AMFRQ9UKV5 643 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 DNPEPQ9ULA0 475 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 TTLL3Q9Y4R7 772 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 SNX10Q9Y5X0 201 aa6.23□□□□□ -1.41
PTCD3-208ENST00000469585 MYOFQ9NZM1 2061 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 A0A087X1B8 175 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 A0A0D9SEW6 157 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 A0A1W2PQF6 199 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 TCRBV5S1A1TA0A578 114 aa6.22□□□□□ -1.41
PTCD3-208ENST00000469585 ZNF487B1APH4 448 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms