RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 KATNB1Q9BVA0 655 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 MTMR12Q9C0I1 747 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 TRPV4Q9HBA0 871 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 XAB2Q9HCS7 855 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 LEF1Q9UJU2 399 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ACAD8Q9UKU7 415 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 RNF150Q9ULK6 438 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 FAF1Q9UNN5 650 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ZFP37Q9Y6Q3 630 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 TRAV24A0A0B4J272 114 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 O00370 1275 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 PLOD2O00469 737 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 XPNPEP2O43895 674 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 ACSL3O95573 720 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 NR3C1P04150 777 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 ZFYP08048 801 aaPredicted RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 IGHV4-38-2P0DP08 117 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 GNAZP19086 355 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 MUTP22033 750 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 TCF7P36402 384 aaPredicted RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 ERVFC1-1P60608 527 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 LGALS3BPQ08380 585 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 PTK6Q13882 451 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 MPP7Q5T2T1 576 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 CYP4A22Q5TCH4 519 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 NOTUMQ6P988 496 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 ZNF449Q6P9G9 518 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 DZIP1Q86YF9 867 aaKnown RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 FOXP4Q8IVH2 680 aaPredicted RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 SIX6OS1Q8N1H7 587 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 SLC24A4Q8NFF2 622 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 GDAP1Q8TB36 358 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 KCNE4Q8WWG9 221 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 STAMBPL1Q96FJ0 436 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 THOC1Q96FV9 657 aaKnown RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 NSL1Q96IY1 281 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 TRAF4Q9BUZ4 470 aaPredicted RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 GTPBP2Q9BX10 602 aaKnown RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 PRRG4Q9BZD6 226 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 FGF21Q9NSA1 209 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 CHCHD3Q9NX63 227 aaKnown RBP4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 ERAP1Q9NZ08 941 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 FLRT3Q9NZU0 649 aa4.68□□□□□ -1.66
GAPVD1-211ENST00000467707 CAVIN2O95810 425 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 C9P02748 559 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 SMIM18P0DKX4 95 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 LIFP15018 202 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 EFNA1P20827 205 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 CA6P23280 308 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 EPHA2P29317 976 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 TLX1P31314 330 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 TNNT3P45378 269 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 RPL21P46778 160 aaKnown RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 HERV-K104P61576 105 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 RPL36AP83881 106 aaKnown RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 UGT3A2Q3SY77 523 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 LRRC73Q5JTD7 316 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 C1QTNF12Q5T7M4 302 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 RASGEF1AQ8N9B8 481 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 KBTBD3Q8NAB2 608 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 ATAD1Q8NBU5 361 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 GRAPLQ8TC17 118 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 GRHL3Q8TE85 626 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 PHLDA1Q8WV24 401 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 RAD54LQ92698 747 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 PROX1Q92786 737 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 CORO2AQ92828 525 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 MR1Q95460 341 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 SPATA33Q96N06 139 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 TRMT61BQ9BVS5 477 aaKnown RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 ALDH8A1Q9H2A2 487 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 COPS7BQ9H9Q2 264 aaPredicted RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 GSN-AS1Q9NRJ2 163 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 DDX43Q9NXZ2 648 aaKnown RBP4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 TAAR2Q9P1P5 351 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 KCNG2Q9UJ96 466 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 CDH7Q9ULB5 785 aa4.67□□□□□ -1.66
GAPVD1-211ENST00000467707 OOEPA6NGQ2 149 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 SLC30A4O14863 429 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 ARPC2O15144 300 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 FGF17O60258 216 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 CRYAAP02489 173 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 FAM58BPP0C7Q3 252 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 SPP1P10451 314 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 MARK3P27448 753 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 SOAT1P35610 550 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 CLDN15P56746 228 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 UBASH3AP57075 661 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 TUBB4BP68371 445 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 DMPKQ09013 629 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 ILF2Q12905 390 aaKnown RBP4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 VEZF1Q14119 521 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 PHKG1Q16816 387 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 ITPRIPL2Q3MIP1 535 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 PDLIM3Q53GG5 364 aaPredicted RBP4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 TECRLQ5HYJ1 363 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 SLC27A1Q6PCB7 646 aa4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 SHQ1Q6PI26 577 aaKnown RBP4.66□□□□□ -1.66
GAPVD1-211ENST00000467707 TMEM139Q8IV31 216 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms